Author

Monika Tripathi

Cambridge University Hospitals NHS Foundation Trust

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Approach:experimental assay· 1 Assay:imaging· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Ahmad Miremadi· 2 shared Rebecca Claire FitzgeraldiD· 2 shared A Noorani· 1 shared AJ Metz· 1 shared Alex Northrop· 1 shared Andrew David BeggsiD· 1 shared Andrew Davies· 1 shared Andrew HindmarshiD· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Ahmad Miremadi

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3 papers

Recent·Most cited

Dual-modality imaging of immunofluorescence and imaging mass cytometry for whole slide imaging with accurate single-cell segmentation

Eun Na Kim, Phyllis Zixuan Chen, Dario Bressan, Monika Tripathi, Ahmad Miremadi, Massimiliano di Pietro, Lisa M. Coussens, Gregory J. Hannon, Rebecca Claire Fitzgerald, Lizhe Zhuang, Young Hwan Chang

The paper introduces a dual-modality imaging method combining high-resolution immunofluorescence and imaging mass cytometry to generate whole-slide IMC images with accurate single-cell segmentation.

bioRxiv · Feb 23, 2023 · PreprintBioinformatics

Somatic evolution in non-neoplastic IBD-affected colon

Sigurgeir Ólafsson, Rebecca E. McIntyre, Tim H. H. Coorens, Timothy M. Butler, Hyunchul Jung, Philip S. Robinson, Henry Lee-Six, Mathijs Arnoud Sanders, Kenneth Arestang, Claire Dawson, Monika Tripathi, Konstantina Strongili, Yvette E. Hooks, Michael R. Stratton, Miles Parkes, , Carl A. Anderson

The paper analyzes somatic mutations in colonic crypts of IBD patients and controls, finding higher mutation rates and clonal expansions in IBD-affected tissue.

Cell · Jul 21, 2020Peer-reviewedGenetics

Low-cost and clinically applicable copy number profiling using repeat DNA

Sam Abujudeh, Sebastian S. Zeki, MCV van Lanschot, Mark Pusung, Jamie M. J. Weaver, X Li, A Noorani, AJ Metz, Jan Bornschein, Lawrence Bower, Ahmad Miremadi, Rebecca Claire Fitzgerald, Edward R. Morrissey, Andy G. Lynch, Ayesha Noorani, , Richard Calvin Turkington

The paper introduces conliga, a method for inferring high-resolution SCNA profiles from a low-cost and simple assay, addressing the need for affordable SCNA analysis in clinical settings.

bioRxiv · Aug 19, 2018 · PreprintGenomics