Author

Nina Barua

Complete Genomics (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 3

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 3 Approach:experimental assay· 2 Research Focus:variant calling· 2 Research Focus:deconvolution· 1 Assay:DNA methylation· 1 Research Focus:genome assembly· 1 Organism:human· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Ao CheniD· 3 shared Chongjun XuiD· 3 shared Radoje Drmanac· 3 shared Snezana Drmanac· 3 shared Andrei Alexeev· 2 shared Christian Villarosa· 2 shared Jian WangiD· 2 shared Lin Wang· 2 shared

Activity by Year

2019-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Ao ChenORCID

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Author profile →

3 papers

Recent·Most cited

CoolMPS™: Advanced massively parallel sequencing using antibodies specific to each natural nucleobase

Snezana Drmanac, Matthew J. Callow, Linsu Chen, Ping Zhou, Leon Eckhardt, Chongjun Xu, Meihua Gong, Scott Gablenz, Jyothi Rajagopal, Qing Yuan Yang, Christian Villarosa, Anthony Au, Kyle Davis, Alexander Jorjorian, Jingjing Wang, , Radoje Drmanac

The paper introduces a new sequencing chemistry (CoolMPS) that improves signal intensity and eliminates scar interference in massively parallel sequencing.

bioRxiv · Feb 19, 2020 · PreprintGenomics

Advanced Whole Genome Sequencing Using an Entirely PCR-free Massively Parallel Sequencing Workflow

Hanjie Shen, Pengjuan Liu, Zhanqing Li, Fang Chen, Hui Jiang, Shiming Shi, Yang Xi, Qiaoling Li, Xiaojue Wang, Jing Zhao, Xinming Liang, Yinlong Xie, Lin Wang, Wenlan Tian, Tam Berntsen, , Radoje Drmanac

This paper demonstrates that PCR-free whole genome sequencing using the DNBSEQ platform and machine learning variant calling significantly reduces InDel errors and improves variant calling performance.

bioRxiv · Dec 20, 2019 · PreprintGenomics

Efficient long single molecule sequencing for cost effective and accurate sequencing, haplotyping, and de novo assembly

Ou Wang, Robert G. Chin, Xiaofang Cheng, Michelle Ka Yan Wu, Qing Mao, Jingbo Tang, Yuhui Sun, Ellis Anderson, Han K. Lam, Dan Chen, Yujun Zhou, Linying Wang, Fei Fan, Yan Zou, Yinlong Xie, , Brock A. Peters

This paper introduces stLFR, a low-cost method for long DNA sequencing that enables accurate variant calling, haplotyping, and de novo assembly.

Genome Research · May 1, 2019Peer-reviewedGenomics