Author

Paolo Canigiula

Children's National

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genetic & Genomic Medicine· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Assay:long-read sequencing· 1 Organism:mouse· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Aidan Coffey· 1 shared Andrey Nikolaevich ShkoporoviD· 1 shared Anne O’Donnell‐LuriaiD· 1 shared Benedict PateniD· 1 shared Brandy McNulty· 1 shared Brian E. Mangilog· 1 shared Cecilia A. NoeckeriD· 1 shared Christina Anne Austin-TseiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperMicrobiology

Aidan Coffey

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Eggerthella lenta evades bacteriophage through reversible megabase-scale inversions of capsular polysaccharide gene clusters

Peter James Turnbaugh, Shenwei Zhang, Colin Buttimer, Kai R. Trepka, Kathy Lam, Luis Raminrez Hernandez, Cecilia A. Noecker, Paola Soto-Perez, Paolo Canigiula, Edwin Ortega, Jenny Lee, Lorenzo Ramirez, Gina Partipilo, Hugh Lawrence, Francesca Bottacini, , Colin Hill

This study identifies a phage-resistant sub-population of Eggerthella lenta in mice, linked to reversible genomic inversions and altered capsule production.

bioRxiv · Apr 25, 2026 · PreprintMicrobiology

Advancing long-read nanopore genome assembly and accurate variant calling for rare disease detection

Shloka Negi, Sarah L. Stenton, Seth Berger, Paolo Canigiula, Brandy McNulty, Ivo Violich, Joshua M.V. Gardner, Todd L. Hillaker, Sara M. O’Rourke, Melanie O’Leary, Elizabeth Carbonell, Christina Anne Austin-Tse, Gabrielle Lemire, Jillian Serrano, Brian E. Mangilog, , Benedict Paten

This study evaluates the diagnostic yield of long-read nanopore sequencing in rare disease detection, finding it covers more genes and detects additional variants compared to short-read sequencing.

The American Journal of Human Genetics · Jan 24, 2025Peer-reviewedGenetic & Genomic Medicine