Author

Rachel L. Ehrlich

Drexel University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:human· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Research Focus:database / resource· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Joshua Chang MelliD· 3 shared Garth D. EhrlichiD· 2 shared Jocelyn A. Hammond· 2 shared Joshua P. EarliD· 2 shared Sergey V. Balashov· 2 shared Alan D. WorkmaniD· 1 shared Angelina L Wang· 1 shared Archana S. Bhat· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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3 shared papersGenomics

Joshua Chang MellORCID

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Author profile →

3 papers

Recent·Most cited

Identification of disease-specific alleles and gene duplications from 1,600 Haemophilus influenzae genomes using predicted protein analyses from an unsupervised language model and clinical metadata

Phillip R Palmer, Joshua P. Earl, Joshua Chang Mell, Kelvin L. Koser, Jocelyn A. Hammond, Rachel L. Ehrlich, Sergey V. Balashov, Azad Ahmed, Steven Lang, Kevin M. Raible, Angelina L Wang, Brian L. Wigdahl, Ravinder Kaur, Michael E. Pichichero, Will Dampier, Garth D. Ehrlich

The paper identifies disease-specific alleles and gene duplications in H. influenzae by analyzing protein sequences and clinical metadata from 1,600 genomes.

bioRxiv · Mar 15, 2026 · PreprintGenomics

Linked-Pair Long-Read Sequencing Strategy for Targeted Resequencing and Enrichment

Lahari Uppuluri, Christina Huan Shi, Dharma T. Varapula, Eleanor Young, Rachel L. Ehrlich, Yilin Wang, Danielle Piazza, Joshua Chang Mell, Kevin Yuk-Lap Yip, Ming Xiao

The paper introduces a linked-pair long-read sequencing strategy for targeted resequencing, enabling efficient enrichment of genomic regions with haplotype information.

bioRxiv · Oct 26, 2023 · PreprintGenomics

Species-level bacterial community profiling of the healthy sinonasal microbiome using Pacific Biosciences sequencing of full-length 16S rRNA genes

Joshua P. Earl, Nithin D. Adappa, Jarosław E. Król, Archana S. Bhat, Sergey V. Balashov, Rachel L. Ehrlich, James N. Palmer, Alan D. Workman, Mariel T. Blasetti, Bhaswati Sen, Jocelyn A. Hammond, Noam A. Cohen, Garth D. Ehrlich, Joshua Chang Mell

The paper presents a pipeline using PacBio CCS to sequence full-length 16S rRNA genes for species-level microbiome analysis, showing high accuracy in mock communities and variation in sinonasal microbiomes.

Microbiome · Oct 23, 2018Peer-reviewedBioinformatics