Author

Raegan Mink

University of California San Diego

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:E. coli· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Adam M. FeistiD· 2 shared Alyssa Jasmine ChiangiD· 1 shared Amitesh AnandiD· 1 shared Arjun PateliD· 1 shared Austin C.V. Doughty· 1 shared Bernhard Ørn PalssoniD· 1 shared Divya Meparambu PrabhakaraniD· 1 shared Elina C. Olson· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersBioengineering

Adam M. FeistORCID

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Author profile →

2 papers

Recent·Most cited

Evolved microbial diversity enables combinatoric biosensing in complex environments

Alyssa Jasmine Chiang, Nicholas Csicsery, Richard O’Laughlin, Leo A. Baumgart, Elizabeth Stasiowski, Phuc Nguyen, Austin C.V. Doughty, Myra Ashraf, Raegan Mink, Elina C. Olson, Michael Ferry, Adam M. Feist, Nan Hao, Karsten Zengler, Jeff Hasty

The paper develops a framework using evolved microbial diversity and machine learning to enable combinatoric biosensing of multiple analytes in complex environments.

Cell Systems · Aug 18, 2026Peer-reviewedBioengineering

Aerobicity stimulon in Escherichia coli revealed using multi-scale computational systems biology of adapted respiratory variants

Arjun Patel, Neha Banwani, Raegan Mink, Divya Meparambu Prabhakaran, Snehal V. Khairnar, Adam M. Feist, Bernhard Ørn Palsson, Amitesh Anand

The paper identifies an aerobicity stimulon in E. coli through computational analysis of evolved respiratory variants, showing gene groups co-regulated with aerobic capacity and proteome reallocation.

iScience · Jan 15, 2026Peer-reviewedSystems Biology