Author

Robert Foreman

University of California, Los Angeles

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Systems Biology· 3

Signature Assays, Organisms & Methods

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Organism:mouse· 2 Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Roy WollmaniD· 3 shared Alexander HoffmanniD· 1 shared Brooks E. Taylor· 1 shared Douglas V. ArnesoniD· 1 shared Fernando Gómez‐PinillaiD· 1 shared Guanglin ZhangiD· 1 shared Marie Oliver MetzigiD· 1 shared Russell LittmaniD· 1 shared

Activity by Year

2020-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersSystems Biology

Roy WollmanORCID

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3 papers

Recent·Most cited

JSTA: joint cell segmentation and cell type annotation for spatial transcriptomics

Russell Littman, Zachary Hemminger, Robert Foreman, Douglas V. Arneson, Guanglin Zhang, Fernando Gómez‐Pinilla, Xia Yang, Roy Wollman

JSTA improves spatial transcriptomics accuracy by jointly segmenting cells and annotating their types, revealing detailed spatial gene expression patterns in mouse hippocampus.

Molecular Systems Biology · May 31, 2021Peer-reviewedSystems Biology

An incoherent feedforward loop interprets NFκB/RelA dynamics to determine TNF-induced necroptosis decisions

Marie Oliver Metzig, Ying Tang, Simon A. Mitchell, Brooks E. Taylor, Robert Foreman, Roy Wollman, Alexander Hoffmann

The paper identifies an incoherent feedforward loop involving NFκB/RelA and A20 that determines TNF-induced necroptosis decisions based on dynamic signaling.

Molecular Systems Biology · Dec 1, 2020Peer-reviewedSystems Biology

Mammalian gene expression variability is explained by underlying cell state

Robert Foreman, Roy Wollman

The paper quantifies the relative contributions of cell state and transcriptional bursting to gene expression variability in mammalian cells using MERFISH and Ca2+ response data.

Molecular Systems Biology · Feb 1, 2020Peer-reviewedSystems Biology