Author

S. Onami

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Cell Biology· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:mouse· 2 Approach:statistical model· 2 Approach:biophysical modeling· 1 Research Focus:cell signaling & trafficking· 1 Organism:chicken / avian· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

S. Shinkai· 3 shared H. Fujita· 1 shared H. Masuya· 1 shared H. Miura· 1 shared I. Hiratani· 1 shared I. Jansen· 1 shared K. Abe· 1 shared K. Fujimoto· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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3 shared papersBiophysics

S. Shinkai

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Ontology for Cellular Senescence Mechanisms

Y. Yamagata, T. Fukuyama, S. Onami, H. Masuya

This paper proposes an ontological model to organize knowledge of cellular senescence mechanisms for computer-readable integration and analysis.

bioRxiv · Mar 9, 2023 · PreprintCell Biology

The centromere/kinetochore is assembled through CENP-C oligomerization

M. Hara, M. Ariyoshi, T. Sano, R.-s. Nozawa, S. Shinkai, S. Onami, I. Jansen, T. Hirota, T. Fukagawa

This study shows that CENP-C oligomerization is essential for centromere function by organizing centromeric chromatin and maintaining kinetochore assembly in vertebrates.

bioRxiv · Aug 17, 2022Cell Biology

Single-molecule tracking of Nanog and Oct4 in mouse embryonic stem cells

K. Okamoto, H. Fujita, Y. Okada, S. Onami, S. Shinkai, K. Abe, K. Fujimoto, T. M. Watanabe

The paper tracks Nanog and Oct4 in mouse embryonic stem cells to study their roles in pluripotency, finding that Nanog interacts longer with targets during differentiation, suggesting a feedback mechanism.

bioRxiv · Aug 8, 2022 · PreprintBiophysics

Microrheology for Hi-C Data Reveals the Spectrum of the Dynamic 3D Genome Organization

S. Shinkai, T. Sugawara, H. Miura, I. Hiratani, S. Onami

This paper introduces a microrheology method for Hi-C data to analyze the dynamic 3D genome organization, revealing rigid TAD boundaries and liquid-like inter-compartment interactions during neural differentiation.

bioRxiv · Sep 5, 2019Biophysics