Author

S.-y. Miyagishima

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Evolutionary Biology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 2 Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Organism:C. elegans· 1 Research Focus:cell type annotation· 1 Assay:cryo-EM· 1 Assay:DNA methylation· 1 Organism:plant (other)· 1

Frequent Co-Authors

S. Hirooka· 2 shared B. Jamge· 1 shared D. Schubert· 1 shared E. Axelsson· 1 shared F. Berger· 1 shared F. Romani· 1 shared G. Tanifuji· 1 shared J. Bowman· 1 shared

Activity by Year

2022-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersPlant Biology

S. Hirooka

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Structure of PSI-LHCI from Cyanidium caldarium provides evolutionary insights into conservation and diversity of red-lineage LHCs

K. Kato, T. Hamaguchi, M. Kumazawa, Y. Nakajima, K. Ifuku, S. Hirooka, Y. Hirose, S.-y. Miyagishima, T. Suzuki, K. Kawakami, N. Dohmae, K. Yonekura, J.-R. Shen, R. Nagao

The paper determines the structure of PSI-LHCI from Cyanidium caldarium and investigates its evolutionary relationships with other red-lineage LHCs.

bioRxiv · Oct 25, 2023 · PreprintPlant Biology

Nitrate Assimilation Underlying Kleptoplasty

M. Maruyama, T. Kagamoto, Y. Matsumoto, R. Onuma, S.-y. Miyagishima, G. Tanifuji, M. Nakazawa, Y. Kashiyama

This study identifies RvNaRL, a nitrate reductase gene acquired via horizontal gene transfer in R. viridis, which enables nitrate assimilation despite its heterotrophic lineage.

bioRxiv · Dec 4, 2022 · PreprintBiochemistry

Transposons repressed by H3K27me3 were co-opted as cis-regulatory elements of H3K27me3 controlled protein coding genes during evolution of plants

T. Hisanaga, S. Wu, F. Romani, T. Kowar, R. Linterman, B. Jamge, S. A. Montgomery, E. Axelsson, T. Dierschke, J. Bowman, T. Fujiwara, S. Hirooka, S.-y. Miyagishima, L. Dolan, D. Schubert, F. Berger

The paper investigates how H3K27me3 marks transposons in different plant lineages and shows that these elements were co-opted as cis-regulatory elements for PRC2-controlled genes during evolution.

bioRxiv · Oct 24, 2022 · PreprintEvolutionary Biology