Author

Sonal Somvanshi

Baylor College of Medicine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Research Focus:cell type annotation· 3 Research Focus:differential expression· 3 Research Focus:gene regulatory network inference· 3 Organism:human· 3 Approach:experimental assay· 2 Approach:statistical model· 2 Assay:DNA methylation· 1

Frequent Co-Authors

Hua‐Sheng ChiuiD· 3 shared Mohammad Javad Najaf Panah· 3 shared Pavel SumaziniD· 3 shared Andras Attila HeczeyiD· 2 shared Barry Zorman· 2 shared Jessica L. EppsiD· 2 shared Kathleen A. Scorsone· 2 shared Sanjeev A. VasudevaniD· 2 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Hua‐Sheng ChiuORCID

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3 papers

Recent·Most cited

Asynchronous Transitions from Hepatoblastoma to Carcinoma in High-Risk Pediatric Tumors

Xinjian Yu, Stephen Frederick Sarabia, Martin Urbicain, Sonal Somvanshi, Roma H. Patel, Priyanka Rao, Tuan M. Tran, Yen-Ping Yeh, Keng-Shih Chang, Yi-Tzu Lo, Jessica L. Epps, Kathleen A. Scorsone, Hua‐Sheng Chiu, Emporia Faith Hollingsworth, Cintia Perez, , Pavel Sumazin

The paper characterizes hepatoblastoma with carcinoma features (HBCs) using multi-omics data, revealing their heterogeneous composition, worse outcomes, and origin from arrested HB cells due to WNT signaling.

Journal of Hepatology · Feb 28, 2026Peer-reviewedGenomics

Characterization of Chemoresistant Cell Populations Improves Risk Stratification and Therapy Prediction in Pediatric AML

Mohammad Javad Najaf Panah, Alexandra McLean Stevens, Michael Krueger, Max P Rochette, Sohani K Sandhu, Lana E Kim, Hua‐Sheng Chiu, Jessica L. Epps, Sonal Somvanshi, Barry Zorman, María Rodríguez Martínez, Marianna Rapsomaniki, Susanne Unger, Burkhard Becher, Joanna S. Yi, , Pavel Sumazin

The paper identifies chemoresistant cell populations in pediatric AML that improve risk prediction and reveal therapeutic targets for high-risk patients.

bioRxiv · Sep 25, 2025 · PreprintCancer Biology

Coordinated regulation by lncRNAs results in tight lncRNA-target couplings

Hua‐Sheng Chiu, Sonal Somvanshi, Chung-Te Chang, Eric James de Bony de Lavergne, Zhaowen Wei, Chih-Hung Hsieh, Wim Trypsteen, Kathleen A. Scorsone, Ektaben Patel, Tien T. Tang, David B. Flint, Mohammad Javad Najaf Panah, Hyunjae Ryan Kim, Purva Rathi, Yan‐Hwa Wu Lee, , Pavel Sumazin

The paper identifies lncRNAs that coordinately regulate both transcription and post-transcriptional processing of their targets, showing tight coupling between lncRNA and target abundance, with implications for cancer gene regulation.

Cell Genomics · Jul 7, 2025Peer-reviewedBioinformatics