Author

T. C. Mockler

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 10 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 9 Approach:experimental assay· 7 Research Focus:gene regulatory network inference· 7 Research Focus:cell type annotation· 5 Assay:bulk RNA-seq· 4 Approach:statistical model· 4 Research Focus:chromatin & epigenetic regulation· 3 Research Focus:development & morphogenesis· 3

Frequent Co-Authors

C. Lizarraga· 2 shared D. A. Nusinow· 2 shared D. Bryant· 2 shared E. Agnew· 2 shared H. Huang· 2 shared N. Fahlgren· 2 shared T. P. Michael· 2 shared A. E. Yocca· 1 shared

Activity by Year

2017-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 11 mutual co-author links

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2 shared papersPlant Biology

C. Lizarraga

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Author profile →

11 papers

Recent·Most cited

Natural Variation in Brachypodium distachyon Responses to Combined Abiotic Stresses

E. Ludwig, S. Polydore, J. Berry, J. Sumner, T. Ficor, E. Agnew, K. Haines, K. Greenham, N. Fahlgren, T. C. Mockler, M. A. Gehan

This study analyzes phenotypic and genetic variation in Brachypodium distachyon under drought, heat, and combined stresses to identify SNPs associated with stress responses.

bioRxiv · Oct 14, 2022 · PreprintPlant Biology

Developmental Effects on Relative Use of PEPCK and NADP-ME Pathways of C4 Photosynthesis in Maize

J. J. Arp, S. Kambhampati, K. Chu, S. Koley, L. M. Jenkins, T. C. Mockler, D. K. Allen

This study examines how the proportion of two C4 pathways in maize depends on canopy position rather than leaf age.

bioRxiv · Jun 25, 2021 · PreprintPlant Biology

The recent evolutionary rescue of a staple crop depended on over half a century of global germplasm exchange

K. T. Muleta, T. Felderhoff, N. Winans, R. Walstead, J. R. Charles, J. S. Armstrong, S. Mamidi, C. Plott, J. P. Vogel, P. G. Lemaux, T. C. Mockler, J. Grimwood, J. Schmutz, G. Pressoir, G. P. Morris

The paper identifies a globally rare East African allele of RMES1 that conferred resistance to sugarcane aphids in Haitian sorghum, demonstrating the importance of global germplasm exchange for evolutionary rescue.

bioRxiv · May 11, 2021Evolutionary Biology

Regulatory signatures of drought response in stress resilient Sorghum bicolor

R. K. Parvathaneni, I. Kumar, M. Braud, P. Ozersky, T. C. Mockler, A. L. Eveland

This study identifies drought-inducible regulatory modules in sorghum by integrating chromatin accessibility and transcriptional data, linking them to water use efficiency variation across genetic diversity.

bioRxiv · Aug 7, 2020 · PreprintPlant Biology

Genome and time-of-day transcriptome of Wolffia australiana link morphological extreme minimization with un-gated plant growth

T. P. Michael, E. Ernst, N. Hartwick, P. Chu, D. Bryant, S. Gilbert, S. Ortleb, E. L. Baggs, K. S. Sree, K. J. Appenroth, J. Fuchs, F. Jupe, J. P. Sandoval, K. V. Krasileva, L. Borisjuk, , E. Lam

This study analyzes the genome and time-of-day transcriptome of Wolffia australiana to link its extreme morphological minimization with reduced circadian regulation and continuous growth.

bioRxiv · Mar 31, 2020Plant Biology

Exceptional subgenome stability and functional divergence in allotetraploid teff, the primary cereal crop in Ethiopia

R. VanBuren, C. M. Wai, J. Pardo, A. E. Yocca, X. Wang, H. Wang, S. R. Chaluvadi, D. Bryant, P. P. Edger, J. L. Bennetzen, T. C. Mockler, T. P. Michael

This study presents a chromosome-scale genome assembly of teff and reveals exceptional subgenome stability and functional divergence, which may contribute to its resilience and diversification.

Nature Communications · Feb 14, 2020Peer-reviewedPlant Biology

DCT4 - a new member of the dicarboxylate transporter family in C4 grasses.

S. Weissmann, P. Huang, K. Furuyama, M. Wiechert, M. Taniguchi, J. Schnable, T. Brutnell, T. C. Mockler

This study identifies and characterizes DCT4, a new dicarboxylate transporter in C4 grasses, showing its role in malate transport during photosynthesis and sub-functionalization in the PACMAD clade.

bioRxiv · Sep 13, 2019Plant Biology

Genomewide association study reveals transient loci underlying the genetic architecture of biomass accumulation under cold stress in Sorghum.

N. Shakoor, E. Agnew, G. Ziegler, S. Lee, C. Lizarraga, N. Fahlgren, I. Baxter, T. C. Mockler

The paper conducts a genome-wide association study on sorghum accessions under cold stress to identify transient loci linked to biomass accumulation and growth traits.

bioRxiv · Sep 8, 2019 · PreprintPlant Biology

Phytochromes measure photoperiod in Brachypodium

M. Gao, F. Geng, C. Klose, A.-M. Staudt, H. Huang, D. Nguyen, H. Lan, T. C. Mockler, D. A. Nusinow, A. Hiltbrunner, E. Schaefer, P. A. Wigge, K. E. Jaeger

This study shows that phytochrome C (phyC) in Brachypodium distachyon acts as a molecular timer that communicates night length information to the circadian clock protein ELF3, regulating photoperiodic responses.

bioRxiv · Jul 9, 2019 · PreprintPlant Biology

Cross-Species Complementation Reveals Conserved Functions For EARLY FLOWERING 3 Between Monocots And Dicots

H. Huang, M. Gehan, S. E. Huss, S. Alvarez, C. Lizarraga, E. L. Gruebbling, J. Gierer, M. J. Naldrett, R. Bindbeutel, B. S. Evans, T. C. Mockler, D. A. Nusinow

The paper functionally complements Arabidopsis ELF3 with orthologs from Brachypodium and Setaria, showing conserved molecular and physiological roles despite sequence divergence.

bioRxiv · May 4, 2017Plant Biology

Precise insertion and guided editing of higher plant genomes using Cpf1 CRISPR nucleases

M. B. Begemann, B. N. Gray, E. January, G. C. Gordon, Y. He, H. Liu, X. Wu, T. P. Brutnell, T. C. Mockler, M. Oufattole

This study demonstrates that Cpf1 nucleases from Francisella novicida and Lachnospiraceae bacterium ND2006 can efficiently insert genes into the rice genome via homology directed repair.

bioRxiv · Feb 20, 2017Plant Biology