Author

W. M. de Vos

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 6

Signature Assays, Organisms & Methods

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Organism:human· 6 Research Focus:cell type annotation· 4 Assay:metagenomics· 4 Approach:statistical model· 3 Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1

Frequent Co-Authors

H. Smidt· 2 shared A. Fullam· 1 shared A. Glazek· 1 shared A. Ikram· 1 shared A. Orakov· 1 shared A. Saleem· 1 shared A. Salonen· 1 shared A.-M. Pajari· 1 shared

Activity by Year

2017-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 10 mutual co-author links

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2 shared papersMicrobiology

H. Smidt

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Unique Pakistani gut microbiota highlights population-specific microbiota signatures of type 2 diabetes mellitus

A. Saleem, A. Ikram, E. Dikareva, E. Lahtinen, D. Matharu, A.-M. Pajari, W. M. de Vos, F. Hasan, A. Salonen, C. Jian

The paper analyzes the gut microbiota of Pakistani adults with and without T2D, finding unique microbial signatures and associations with inflammation markers.

Gut Microbes · Dec 31, 2022Peer-reviewedMicrobiology

Drivers and Determinants of Strain Dynamics Following Faecal Microbiota Transplantation

T. S. Schmidt, S. S. Li, O. M. Maistrenko, W. Akkani, L. P. Coelho, S. Dolai, A. Fullam, A. Glazek, R. Hercog, H. Herrema, F. Jung, S. Kandels, A. Orakov, T. Van Rossum, V. Benes, , P. Bork

This study identifies recipient and donor microbiome factors that determine strain dynamics after FMT, independent of clinical outcomes.

bioRxiv · Sep 30, 2021Microbiology

Unravelling lactate-acetate conversion to butyrate by intestinal Anaerobutyricum and Anaerostipes species

S. A. Shetty, S. Boeren, T. P. Nam Bui, H. Smidt, W. M. De Vos

This study identifies a gene cluster in Anaerobutyricum and Anaerostipes species that enables lactate and acetate conversion to butyrate, highlighting their adaptation for intestinal metabolism.

Environmental Microbiology · Oct 12, 2020Peer-reviewedMicrobiology

Intestinal transkingdom analysis on the impact of antibiotic perturbation in health and critical illness

B. W. Haak, R. Argelaguet, C. M. Kinsella, R. F. Kullberg, J. M. Lankelma, T. B. Hakvoort, F. Hugenholtz, S. Kostidis, M. Giera, W. J. de Jonge, M. J. Schultz, T. van Gool, T. van der Poll, W. M. de Vos, L. van den Hoek, W. J. Wiersinga

The paper analyzes the impact of antibiotic perturbation on intestinal transkingdom interactions in health and critical illness using multi-omics data.

bioRxiv · Jun 25, 2020 · PreprintMicrobiology

A comparative and functional genomics analysis of the genus Romboutsia provides insight into adaptation to an intestinal lifestyle

J. Gerrritsen, B. Hornung, J. Ritari, L. Paulin, G. T. Rijkers, P. J. Schaap, W. M. de Vos, H. Smidt

The paper compares the genomes of three Romboutsia species to understand their metabolic adaptations to intestinal and soil environments.

bioRxiv · Nov 17, 2019 · PreprintMicrobiology

Reproducibility and repeatability of six high-throughput 16S rDNA sequencing protocols for microbiota profiling

S. Raju, S. Lagstrom, P. Ellonen, W. M. De Vos, J. Eriksson, E. Weiderpass, T. B. Rounge

The paper evaluates six 16S rDNA sequencing protocols for microbiota profiling, finding that TS-tailed methods provide the highest reproducibility and repeatability on the HiSeq platform.

bioRxiv · Dec 27, 2017Microbiology