Author

W. P. Kot

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Research Focus:cell type annotation· 2 Research Focus:host-pathogen & immune response· 2 Assay:metagenomics· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

D. S. Nielsen· 3 shared L. Deng· 2 shared L. H. Hansen· 2 shared L. Krych· 2 shared A. B. Carstens· 1 shared A. Gobbi· 1 shared A. K. Hansen· 1 shared A. K. Koefoed· 1 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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3 shared papersMicrobiology

D. S. Nielsen

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5 papers

Recent·Most cited

A single strand-based library preparation method for unbiased virome characterization

X. Zhai, A. Gobbi, W. P. Kot, L. Krych, D. S. Nielsen, L. Deng

This paper introduces a single-stranded library preparation method for virome characterization, showing improved accuracy and reduced bias compared to existing methods.

bioRxiv · Mar 31, 2024 · PreprintMicrobiology

CRISPR-Cas provides limited phage immunity to a prevalent gut bacterium in gnotobiotic mice

T. S. Rasmussen, A. K. Koefoed, L. Deng, M. K. Muhammed, G. M. Rousseau, W. P. Kot, S. Sprotte, H. Neve, C. M. A. P. Franz, A. K. Hansen, F. K. Vogensen, S. Moineau, D. S. Nielsen

This study shows that the CRISPR-Cas system of Eggerthella lenta provides limited phage immunity in vitro and in vivo, allowing coexistence of phage and bacteria in the gut.

bioRxiv · May 20, 2022Microbiology

A Novel and Direct Metamobilome Approach improves the Detection of Larger-sized Circular Elements across Kingdoms

K. S. Alanin, T. S. Joergensen, P. D. Browne, B. Petersen, L. Riber, W. P. Kot, L. H. Hansen

This paper introduces a novel metamobilome approach that improves detection of larger circular mobile genetic elements by avoiding methodological biases from multiple displacement amplification.

Plasmid · May 1, 2021Peer-reviewedMicrobiology

Supplementation of a lacto-fermented rapeseed-seaweed blend promotes gut microbial- and gut immune-modulation in weaner piglets

Y. Hui, P. Tamez-Hidalgo, T. Cieplak, G. D. Satessa, W. P. Kot, S. K. Soren, M. O. Nielsen, D. S. Nielsen, L. Krych

This study shows that a lacto-fermented rapeseed-seaweed blend improves gut health and microbiota composition in weaner piglets, with no additional benefit from increasing the blend's dietary inclusion beyond 2.5%.

bioRxiv · Sep 22, 2020Microbiology

Genomic characterization of three novel Pseudomonas phages within the subfamily of Autographivirinae isolated from organic waste

J. B. Joergensen, A. M. Djurhuus, A. B. Carstens, W. P. Kot, C. E. Morris, L. H. Hansen

The paper isolates and characterizes three novel Pseudomonas phages from organic waste, showing they belong to the Autographivirinae subfamily but are distantly related to other members.

bioRxiv · Jan 20, 2020 · PreprintMicrobiology