Author

Y. Katsuyama

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Bioengineering· 1

Signature Assays, Organisms & Methods

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Organism:E. coli· 2 Research Focus:protein folding & dynamics· 2 Approach:experimental assay· 1 Approach:machine learning (classical)· 1 Assay:proteomics· 1 Assay:structural biology· 1

Frequent Co-Authors

Y. Ohnishi· 2 shared A. Chen· 1 shared H. Yamaguchi· 1 shared J. P. Noel· 1 shared J. T. Mindrebo· 1 shared M. D. Burkart· 1 shared T. D. Davis· 1 shared W. E. Kim· 1 shared

Activity by Year

2022-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersBioengineering

Y. Ohnishi

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2 papers

Recent·Most cited

Engineering the substrate specificity of toluene degrading enzyme XylM using biosensor XylS and machine learning

Y. Ogawa, Y. Saito, H. Yamaguchi, Y. Katsuyama, Y. Ohnishi

This paper uses a biosensor and machine learning to engineer XylM for improved substrate specificity, achieving 15 times higher productivity than the wild-type.

bioRxiv · Oct 27, 2022Bioengineering

Mechanism-based crosslinking probes capture E. coli ketosynthase FabB in conformationally-distinct catalytic states.

A. Chen, J. T. Mindrebo, T. D. Davis, W. E. Kim, Y. Katsuyama, Z. Jiang, Y. Ohnishi, J. P. Noel, M. D. Burkart

The paper solves crystal structures of E. coli FabB in complex with crosslinked ACPs to elucidate its catalytic mechanism and conformational states.

bioRxiv · Apr 4, 2022 · PreprintBiochemistry