Author

Yan Zhu

Nanfang Hospital

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 2 Neuroscience· 1 Pharmacology & Toxicology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Organism:mouse· 3 Approach:experimental assay· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Assay:CITE-seq· 1

Frequent Co-Authors

Chunhong LaniD· 2 shared Deqiang SuniD· 2 shared Junjie GuaniD· 2 shared Qilong WangiD· 2 shared Sen CheniD· 2 shared Xiujia YangiD· 2 shared Xueqing YuiD· 2 shared Zhenhai ZhangiD· 2 shared

Activity by Year

2021-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersBioinformatics

Chunhong LanORCID

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

PhenoStream: A Cyberinfrastructure for Automated and AI-Based Crop Trait Extraction from Aerial Imagery

Sebastián Varela, Jeremy Ruhter, Erik J. Sacks, Xuying Zheng, Dylan Allen, Anna Hale, Cory Landry, Xianyan Kuang, Blake Long, Ernst Cebert, Yan Zhu, Shatabdi Deb Proma, Sehijpreet Kaur, Diego Jarquín, Jesse I. Morrison, Andrew D. B. Leakey

PhenoStream automates crop trait extraction from aerial imagery, enabling high-throughput phenotyping with reduced latency and manual effort.

bioRxiv · Aug 30, 2026 · PreprintPlant Biology

Developmental Connectomics of the Mouse Cerebellum

Nagaraju Dhanyasi, Yaron Meirovitch, Vikrant Kapoor, Alyssa Michelle Wilson, Shuohong Wang, Donglai Wei, Richard Lee Schalek, Rong Ma, Yuelong Wu, Akhila Manthena, Diégo Cordero Cervantes, Zudi Lin, Yunlei Liu, Sanjana Chimaladinne, Benjamin Morris, , Jeff William Lichtman

This study investigates synaptic connectivity development in the mouse cerebellum, revealing sequential input-dependent wiring and individualized parallel fiber inputs to Purkinje cells.

bioRxiv · Sep 15, 2025 · PreprintNeuroscience

Phosphorylation of Zearalenone retains its toxicity

Muhammad Asaduzzaman, Ivan A. Pavlov, Guillaume St‐Jean, Yan Zhu, Mathieu Castex, Younès Chorfi, Jérôme R. E. del Castillo, Ting Zhou, Imourana Alassane‐Kpembi

This study investigates the toxicity of phosphorylated Zearalenone derivatives and finds they retain cytotoxic, pro-inflammatory, and estrogenic properties.

Journal of Agricultural and Food Chemistry · Nov 16, 2024Peer-reviewedPharmacology & Toxicology

Antibody Upstream Sequences Diversity and Its Biological Implications Revealed by Repertoire Sequencing

Yan Zhu, Xiujia Yang, Cuiyu Ma, Haipei Tang, Qilong Wang, Junjie Guan, Wenxi Xie, Sen Chen, Yuan Chen, Minhui Wang, Chunhong Lan, Deqiang Sun, Lai Wei, Caijun Sun, Xueqing Yu, Zhenhai Zhang

The paper identifies and characterizes the diversity of antibody upstream sequences (AUS) across multiple species using Rep-Seq and 5RACE, revealing new variants and their implications for antibody biology.

Journal of genetics and genomics/Journal of Genetics and Genomics · Jul 16, 2021Peer-reviewedBioinformatics

Knowledge-based antibody repertoire simulation, a novel allele detection tool evaluation and application

Xiujia Yang, Yan Zhu, Huikun Zeng, Sen Chen, Junjie Guan, Qilong Wang, Chunhong Lan, Deqiang Sun, Xueqing Yu, Zhenhai Zhang

The paper evaluates novel allele detection tools using simulated and real antibody repertoire sequencing data and identifies 43 novel alleles.

bioRxiv · Jul 1, 2021 · PreprintBioinformatics