Author

Zilin Cai

Shanghai Jiao Tong University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:mouse· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Chenhuan Zhou· 1 shared Fei Ran LiiD· 1 shared Hongli MaiD· 1 shared Huatai XuiD· 1 shared Jincheng Wang· 1 shared Jinke ChengiD· 1 shared Juehua YuiD· 1 shared Kan YangiD· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperNeuroscience

Chenhuan Zhou

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2 papers

Recent·Most cited

Pathformer: a biological pathway informed Transformer integrating multi-omics data for disease diagnosis and prognosis

Xiaofan Liu, Yuhuan Tao, Zilin Cai, Pengfei Bao, Hongli Ma, Kexing Li, Mengtao Li, Yunping Zhu, Zhi John Lu

Pathformer integrates multi-omics data using a pathway-informed Transformer to improve cancer diagnosis and prognosis prediction.

bioRxiv · May 23, 2023 · PreprintBioinformatics

SENP1 in the retrosplenial agranular cortex regulates core autistic-like symptoms in mice

Kan Yang, Yuhan Shi, Xiujuan Du, Jincheng Wang, Yuefang Zhang, Shifang Shan, Yiting Yuan, Ruoqing Wang, Chenhuan Zhou, Yuting Liu, Zilin Cai, Yanzhi Wang, Liu Fan, Huatai Xu, Juehua Yu, , Zilong Qiu

This study identifies a SENP1 mutation in mice that causes core autistic-like symptoms by disrupting the SENP1-FMRP axis in the retrosplenial agranular cortex.

Cell Reports · Jan 1, 2021Peer-reviewedNeuroscience