Stacia R. Engel

The paper introduces uPheno, a framework for cross-species phenomics integration by harmonizing phenotype data across species and ontologies.

Saccharomyces Genome Database released two S288C annotation updates (R64.4.1, R64.5.1) adding ncRNAs, ORFs and uORFs, overhauled YeastPathways, and expanded search, GFF and web features.

The paper updates the Alliance of Genome Resources' central infrastructure, adding tools and enhancing data management and curation capabilities.

The paper describes recent updates to the Saccharomyces Genome Database, including a new reference genome, allele curation system, and resources for studying human disease using yeast.

The paper introduces a Gene Ontology annotation quality control system that identifies and corrects errors in gene product co-annotation by analyzing mutual exclusivity patterns across biological processes.