Author

Midori A. Harris

University of CambridgeORCID 0000-0003-4148-4606Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 4 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 4 Organism:yeast· 4 Approach:statistical model· 3 Organism:human· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Organism:mouse· 1 Organism:multiple species· 1

Frequent Co-Authors

Valerie WoodiD· 5 shared Kim RutherfordiD· 4 shared Antonia LockiD· 3 shared Chris MungalliD· 2 shared Jürg BähleriD· 2 shared Stacia R. EngeliD· 2 shared Stephen G. OliveriD· 2 shared Alayne CuzickiD· 1 shared

Activity by Year

2019-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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5 shared papersBioinformatics

Valerie WoodORCID

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Author profile →

5 papers

Recent·Most cited

The Unified Phenotype Ontology (uPheno): A framework for cross-species integrative phenomics

Nicolas Matentzoglu, Susan M. Bello, Ray Stefancsik, Sarah M. Alghamdi, Anna V. Anagnostopoulos, James P. Balhoff, Meghan A. Balk, Yvonne M. Bradford, Yasemin Bridges, Tiffany J. Callahan, Harry Caufield, Alayne Cuzick, Leigh Carmody, Anita R. Caron, Vinícius de Souza, , David Osumi-Sutherland

The paper introduces uPheno, a framework for cross-species phenomics integration by harmonizing phenotype data across species and ontologies.

Genetics · Mar 1, 2025Peer-reviewedBioinformatics

Fission stories: Using PomBase to understand Schizosaccharomyces pombe biology

Midori A. Harris, Kim Rutherford, Jacqueline Hayles, Antonia Lock, Jürg Bähler, Stephen G. Oliver, Juan Mata, Valerie Wood

The paper describes PomBase, a database for fission yeast, and highlights its features and contributions to the model organism database community.

Genetics · Dec 23, 2021Peer-reviewedBioinformatics

JaponicusDB: Rapid deployment of a model organism database for an emerging model species

Kim Rutherford, Midori A. Harris, Snezhana Oliferenko, Valerie Wood

JaponicusDB provides a model organism database for S. japonicus, leveraging PomBase's code to support data integration and curation for fission yeast research.

Genetics · Dec 23, 2021Peer-reviewedBioinformatics

Term Matrix: A novel Gene Ontology annotation quality control system based on ontology term co-annotation patterns

Valerie Wood, Seth Carbon, Midori A. Harris, Antonia Lock, Stacia R. Engel, David P. Hill, Kimberly M. Van Auken, Helen L. Attrill, Marc Feuermann, Pascale Gaudet, Ruth C. Lovering, Sylvain Poux, Kim Rutherford, Chris Mungall

The paper introduces a Gene Ontology annotation quality control system that identifies and corrects errors in gene product co-annotation by analyzing mutual exclusivity patterns across biological processes.

Open Biology · Sep 1, 2020Peer-reviewedBioinformatics

Hidden in plain sight: What remains to be discovered in the eukaryotic proteome?

Valerie Wood, Antonia Lock, Midori A. Harris, Kim Rutherford, Jürg Bähler, Stephen G. Oliver

The paper identifies conserved but unstudied proteins in yeast and human, highlighting their potential importance and proposing strategies to better characterize them.

Open Biology · Feb 1, 2019Peer-reviewedMolecular Biology