Author

Cécile Courret

University of RochesterORCID 0000-0001-5849-8014Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Evolutionary Biology· 1 Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:Drosophila· 3 Approach:statistical model· 2 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Amanda M. LarracuenteiD· 2 shared Xiaolu WeiiD· 2 shared Anton A. StrunoviD· 1 shared Aurélie Hua‐VaniD· 1 shared Beatriz M. Navarro-DomíngueziD· 1 shared Daniela I. SchneideriD· 1 shared Eddyson Altidor· 1 shared Eleanor R. HeyworthiD· 1 shared

Activity by Year

2022-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersGenomics

Amanda M. LarracuenteORCID

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3 papers

Recent·Most cited

Evolutionary BiologyMolecular Biology and EvolutionPeer-reviewedSep 1, 2026

Evolutionary persistence of a highly prevalent multicopy mitochondrial-derived nuclear insertion (Mega-NUMT) in Neotropical Drosophila flies

Mercè Montoliu-Nerin, Anton A. Strunov, Eleanor R. Heyworth…·Wolfgang J. Miller

The paper identifies a high-prevalence Mega-NUMT in Drosophila paulistorum using long-read sequencing, suggesting its persistence due to balancing selection.

DOI 10.1093/molbev/msag227

Drosophilalong-read sequencing

𝕏 PostBluesky

GenomicsbioRxivPreprintNov 25, 2022

Centromere-associated retroelement evolution in Drosophila melanogaster reveals an underlying conflict

Lucas W. Hemmer, Sherif Negm, Xuewen Geng…·Amanda M. Larracuente

The paper studies the evolution of G2/Jockey-3, a retroelement associated with centromeres in Drosophila melanogaster, finding it is likely a selfish element that targets centromeres to evade host defenses.

4 citations

Drosophilawhole-genome sequencing

𝕏 PostBluesky

GeneticsPLoS GeneticsPeer-reviewedSep 1, 2022

The nanoCUT&RUN technique visualizes telomeric chromatin in Drosophila

Tao Chen, Xiaolu Wei, Cécile Courret…·Yikang S. Rong

The paper introduces nanoCUT&RUN, a modified CUT&RUN technique for mapping chromatin protein binding sites in Drosophila, showing its effectiveness for TRL, HipHop, and HOAP proteins.

5 citations

DrosophilaChIP-seq

𝕏 PostBluesky