Maik Wolfram-Schauerte

The PhageExpressionAtlas provides a unified resource for time-resolved dual RNA-sequencing data from phage infections, enabling analysis of shared and unique transcriptional patterns across phage-host interactions.

GrooD improves bulk transcriptome deconvolution using gradient boosting and convolution, showing better performance and interpretability on human blood samples from sepsis patients.

The paper describes a method to temporarily modulate phage DNA modifications using NgTET, enabling efficient Cas-mediated mutagenesis and functional analysis of phage epigenome.

This study identifies NAD-capped RNAs during T4 phage infection of E. coli, showing dynamic changes in NAD-capping and revealing a phage-encoded Nudix hydrolase involved in NAD-RNA decapping.