Karsten Krug

This paper evaluates kinase activity inference methods using phosphoproteomics data and benchmarking approaches, finding that curated kinase-substrate libraries significantly impact results.

This study identifies bidirectional phosphorylation changes in Shank3 that regulate synaptic scaling up or down in mouse and rat neurons.

PANOPLY is a cloud-based platform that automates and reproducibly analyzes proteogenomic data by integrating genomic, transcriptomic, proteomic, and post-translational modification data.

Avant-garde improves DIA data analysis by refining signals, reducing interference, and controlling false discovery rates through a data-driven approach.