Krzysztof Ginalski

The paper analyzes ancient genomes from Tiwanaku to show genetic homogeneity in the Lake Titicaca Basin over 1200 years but genetic diversity in ritual core individuals, suggesting foreign influence.

qDSB-Seq quantifies absolute DNA double-strand break frequencies and their genomic coordinates across samples and organisms.

The paper predicts double-strand breaks (DSBs) using epigenomic marks and chromatin context, achieving high accuracy without experimental DSB data.

The paper estimates genome-wide protein abundances and dynamics from gene expression data without assuming steady-state conditions, validated using yeast cell cycle data.