Author

Naoka Murakami

Brigham and Women's HospitalORCID 0000-0001-8168-5811Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:scRNA-seq· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Anand Chellappan ReghuvaraniD· 1 shared Ashwani Kumar· 1 shared Barbara FranchiniD· 1 shared Barbara L. BanburyiD· 1 shared Bony De KumariD· 1 shared Cijiang HeiD· 1 shared E. M. TanviriD· 1 shared Gabriel BarsottiiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperImmunology

Anand Chellappan ReghuvaranORCID

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2 papers

Recent·Most cited

ImmunologybioRxivPreprintMay 7, 2026

Pre-transplant TCR Network Topology Predicts Kidney Allograft Rejection Independent of HLA Mismatch

Nicholas Borcherding, Jes M. Sanders, Greg Martens…·James M. Mathew

This study uses TCR network topology from pre-transplant PBMCs to predict kidney graft rejection, achieving high accuracy independent of HLA mismatch.

DOI 10.64898/2026.05.04.722749

humanscRNA-seq

𝕏 PostBluesky

ImmunologyAmerican Journal of TransplantationPeer-reviewedAug 1, 2025

A T-cell Intrinsic Role for APOL1 Risk Alleles in Allograft Rejection

John F. Pell, E. M. Tanvir, Zhengliang Sun…·Madhav C. Menon

This study identifies a T-cell intrinsic mechanism by which APOL1 risk alleles contribute to kidney rejection through altered calcium signaling and T-cell activation.

DOI 10.1016/j.ajt.2025.07.188

mousebulk RNA-seq

𝕏 PostBluesky