Author

Elsayed T. Mohamed

Novo Nordisk FoundationORCID 0000-0001-9236-3041Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 1 Synthetic Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 2 Approach:experimental assay· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Organism:E. coli· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1

Frequent Co-Authors

Adam M. FeistiD· 3 shared Josefin JohnseniD· 2 shared Pablo I. NikeliD· 2 shared Amitesh AnandiD· 1 shared Anand V. SastryiD· 1 shared Arjun PateliD· 1 shared Bernhard Ørn PalssoniD· 1 shared Cameron R. Lamoureux· 1 shared

Activity by Year

2022-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 32 mutual co-author links

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3 shared papersMicrobiology

Adam M. FeistORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Improving acetate metabolism of Pseudomonas putida KT2440 by evolutionary and rational engineering

Melanie Filbig, Luisa Wachtendonk, Luca A. I. Hampe, Isabel Bator, Josefin Johnsen, Elsayed T. Mohamed, Nicolás Gurdo, Johannes Parschau, Pablo I. Nikel, Adam M. Feist, Till Tiso, Lars M. Blank

This paper improves acetate metabolism in P. putida KT2440 through rational and evolutionary engineering, enhancing growth rate and HAA production.

bioRxiv · Aug 31, 2026 · PreprintMicrobiology

Seven mutations unlock strict synthetic methylotrophy in engineered Pseudomonas putida

Òscar Puiggené, Martina Fricano, Riccardo Rossi, Luc F. M. Jansen, Emre Özdemir, Se Hyeuk Kim, Christina Lenhard, Elsayed T. Mohamed, Stefano Donati, Jochen Förster, Vijayalakshmi Kandasamy, Adam M. Feist, Enrico Orsi, Pablo I. Nikel

The paper engineers Pseudomonas putida to strictly metabolize methanol through seven mutations, enabling growth on methanol as the sole carbon source.

bioRxiv · Jul 22, 2026 · PreprintSynthetic Biology

Lab evolution, transcriptomics, and modeling reveal mechanisms of paraquat tolerance

Kevin Rychel, Justin Tan, Arjun Patel, Cameron R. Lamoureux, Ying Hefner, Richard Szubin, Josefin Johnsen, Elsayed T. Mohamed, Patrick V. Phaneuf, Amitesh Anand, Connor A. Olson, Joon Ho Park, Anand V. Sastry, Laurence Yang, Adam M. Feist, Bernhard Ørn Palsson

The paper uses adaptive laboratory evolution and transcriptomic analysis to identify six mechanisms of paraquat tolerance in E. coli.

bioRxiv · Dec 20, 2022 · PreprintSystems Biology