Author

Joshua Saul Davis

John Hunter HospitalORCID 0000-0001-9864-5699Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Abderrahman HachaniiD· 1 shared Ahmad A. TarhiniiD· 1 shared Alyssa ObermayeriD· 1 shared Anna L Austin· 1 shared Awino Maureiq E. Ojwang’iD· 1 shared Benjamin P. HowdeniD· 1 shared Bernadette YoungiD· 1 shared Daniel J. WilsoniD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperGenomics

Abderrahman HachaniORCID

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2 papers

Recent·Most cited

ImmunologyJournal for ImmunoTherapy of CancerPeer-reviewedFeb 1, 2025

Effector T Cells under Hypoxia have an Altered Transcriptome Similar to Tumor-Stressed T Cells Found in Non-Responsive Melanoma Patients

Mate Z Nagy, Lourdes Plaza-Rojas, Justin C. Boucher…·Jose Alejandro Guevara-Patino

This study shows hypoxia alters T cell transcriptomes in melanoma, correlating with poor clinical outcomes in non-responders to immunotherapy.

13 citationstop 3%

humanbulk RNA-seq

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GenomicseLifePeer-reviewedJun 8, 2022

Niche-specific genome degradation and convergent evolution shaping Staphylococcus aureus adaptation during severe infections

Stefano G. Giulieri, Romain Guérillot, Sebastián Duchêne…·Benjamin P. Howden

This study identifies genome degradation and convergent mutations in Staphylococcus aureus during severe infections, linking them to adaptation and clinical outcomes.

54 citationstop 3%

humanwhole-genome sequencing

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