Author

Yifan Deng

Wuhan UniversityORCID 0000-0002-0077-9718Unclaimed ORCID profile · follow to get notified of new preprints

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Yifan Deng1 paper

Biology Disciplines

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Bioinformatics· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1

Frequent Co-Authors

Aleksandra IvoviciD· 1 shared Alev BaysoyiD· 1 shared Anthony A. FungiD· 1 shared Binfan Chen· 1 shared Bo Tao· 1 shared Chen Liu· 1 shared Dingyao ZhangiD· 1 shared Frank Li· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperPathology

Aleksandra IvovicORCID

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2 papers

Recent·Most cited

Spatial Glyco-Codes Define Human Liver Pathology and Progression

Xiaolong Tian, Anthony A. Fung, Xingbo Shang, Dingyao Zhang, Binfan Chen, Lei Zhang, K E X I N Li, Mei Zhong, Yifan Deng, Mingyu Yang, Yao Lu, Bo Tao, Fu Gao, Alev Baysoy, Xiao Louise Lin, , Rong Fan

This study introduces spatial-GPT, a platform for spatial glycan, protein, and transcriptome profiling in human liver tissues, revealing glyco-codes that define disease states and progression.

bioRxiv · Jul 12, 2026 · PreprintPathology

Enhancing Drug-Drug Interaction Prediction Using Deep Attention Neural Networks

Shichao Liu, Yang Zhang, Yuxin Cui, Yang Qiu, Yifan Deng, Wen Zhang

This paper introduces a Deep Attention Neural Network framework for predicting drug-drug interactions, showing improved performance over existing methods.

IEEE Transactions on Computational Biology and Bioinformatics · May 5, 2022Peer-reviewedBioinformatics