Author

Rohit S. Advani

University of California San DiegoORCID 0000-0002-0110-099XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:metabolomics· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Aileen LuiD· 2 shared Alan K. JarmuschiD· 2 shared Pieter C. DorresteiniD· 2 shared Shaden AguirreiD· 2 shared Alexander A. AksenoviD· 1 shared Alexey V. MelnikiD· 1 shared Alison F. VrbanaciD· 1 shared Allegra T. AroniD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Aileen LuORCID

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2 papers

Recent·Most cited

Physicochemical and Pharmacokinetic Properties Determining Drug Detection in Skin

Wout Bittremieux, Rohit S. Advani, Alan K. Jarmusch, Shaden Aguirre, Aileen Lu, Pieter C. Dorrestein, Shirley M. Tsunoda

The paper uses a random forest classifier to predict which drugs are detectable on skin using metabolomics, finding that nervous system drugs are more likely to be detected.

Clinical and Translational Science · Nov 18, 2021Peer-reviewedBioinformatics

Repository-scale Co- and Re-analysis of Tandem Mass Spectrometry Data

Alan K. Jarmusch, Mingxun Wang, Christine M. Aceves, Rohit S. Advani, Shaden Aguirre, Alexander A. Aksenov, Gajender Aleti, Allegra T. Aron, Anelize Bauermeister, Sanjana Bolleddu, Amina Bouslimani, Andrés Mauricio Caraballo‐Rodríguez, Rama Chaar, Roxana Coras, Emmanuel O. Elijah, , Pieter C. Dorrestein

The paper develops ReDU, a tool for discovering and re-analyzing metabolomics data in GNPS, following FAIR principles.

Nature Methods · Aug 17, 2020Peer-reviewedBioinformatics