Author

David D. Ellison

Lenovo (Japan)ORCID 0000-0002-0752-5569Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell-cell communication· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

Bogdan BintuiD· 1 shared Christopher Zou· 1 shared Cinlong Huang· 1 shared Colin KerniD· 1 shared Daiji OkamuraiD· 1 shared Erwin Poussi· 1 shared J EngreitziD· 1 shared Jiang He· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Bogdan BintuORCID

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2 papers

Recent·Most cited

Cyclic Hypoxia drives Wnt5a-ROR1 stroma-tumor crosstalk promoting breast cancer growth

Yamin Liu, Shaofei Liu, Sarthak Sahoo, Xirui Wang, Wenqiang Du, David D. Ellison, Junaid M. Afzal, Yasir Suhail, Mohit Kumar Jolly, Kshitiz Gupta

This study shows cyclic hypoxia promotes breast cancer growth through WNT5A-ROR1 signaling between stromal and tumor cells in a co-culture model.

bioRxiv · Oct 13, 2026 · PreprintCancer Biology

PantheonOS: An Evolvable Multi-Agent Framework for Automatic Genomics Discovery

Weize Xu, Erwin Poussi, Quan Zhong, Zehua Zeng, Christopher Zou, Xuehai Wang, Yifan Lu, Miao Cui, Daiji Okamura, Cinlong Huang, Jiayuan Ding, Zhe Zhao, Yuheng Yang, Xinhai Pan, Varshini Vijay, , Xiaojie Qiu

PantheonOS introduces a multi-agent framework for automated genomics analysis, achieving super-human performance in batch correction and gene panel selection across diverse biological tasks.

bioRxiv · Feb 27, 2026 · PreprintBioinformatics