Gautier Stoll

This study shows that lysosomal membrane permeabilization enhances the effectiveness of RNA Polymerase I inhibitors against cancer cells.

UPMaBoSS simulates cell population dynamics by extending MaBoSS to model interactions and death/division, revealing TNF-induced resistance mechanisms.

PhysiBoSS integrates multi-scale agent-based modelling with Boolean networks to study cell population dynamics and treatment responses in 2D and 3D environments.

The paper demonstrates the use of the CoLoMoTo Interactive Notebook to analyze a Boolean model of tumor cell invasion, predicting mutations associated with metastasis.

The paper introduces a framework for reproducible analysis of qualitative biological networks using an interactive notebook environment.