Gabrijela Dumbović

Parnet is a CLIP-seq-based foundation model for RNA sequence representation learning that outperforms existing methods in binding profile prediction and generalizes across tasks.

This study identifies QKI as a regulator of splicing fidelity during cardiogenesis by interacting with U6 snRNA to enhance splicing at weak 5' splice sites.

This study identifies the lncRNA Sweetheart as essential for compensatory cardiac hypertrophy after myocardial injury, working synergistically with NKX2-5.

The paper develops VarID2 to quantify biological noise in single-cell RNA-seq data, revealing noise dynamics in hematopoietic stem cells during differentiation and ageing.

The paper identifies Tug1 as essential for male fertility, showing it has three distinct regulatory activities: a cis DNA repressor, a trans-acting lncRNA, and a conserved peptide affecting mitochondrial function.