Author

Benjamin Nebenfuehr

University of Colorado BoulderORCID 0000-0002-1561-6815Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Benjamin Nebenfuehr1 paper

Biology Disciplines

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Genomics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:statistical model· 2 Assay:ChIP-seq· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Alison R. S. PashosiD· 1 shared Arpan DasiD· 1 shared Benjamin J. T. Dodd· 1 shared Bruce Proctor· 1 shared Clara M. Stiefel· 1 shared Colin SempeckiD· 1 shared Dan Timmons· 1 shared Daniel Ahrens· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperGenomics

Alison R. S. PashosORCID

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2 papers

Recent·Most cited

The APE2 nuclease is essential for DNA double strand break repairby microhomology-mediated end-joining.

Hubert Fleury, Myles K. MacEachern, Clara M. Stiefel, Roopesh Anand, Colin Sempeck, Benjamin Nebenfuehr, Kelper Maurer-Alcalá, Kerri A. Ball, Bruce Proctor, Ondrej Beláň, Erin Taylor, Raquel Ortega, Benjamin J. T. Dodd, Laila Weatherly, Djelika Dansoko, , Nausica Arnoult

This study identifies APE2 nuclease as a critical factor for MMEJ repair, showing its role in telomere fusion and DNA repair reporter assays.

Molecular Cell · Apr 11, 2023Peer-reviewedMolecular Biology

Genome-wide binding analysis of 195 DNA Binding Proteins reveals "reservoir" promoters and human specific SVA-repeat family regulation

Soraya I. Shehata, Savannah Spradlin, Alison R. S. Pashos, Graycen E. Wheeler, Arpan Das, Giulia Ada Corbet, Benjamin Nebenfuehr, Daniel Ahrens, Devin Tauber, Shelby R. Lennon, Kevin Choi, Thao Huynh, Tom Weiser, Kristen Schneider, Michael Bradshaw, , John L. Rinn

The paper re-analyzes ENCODE data to identify reservoir promoters and human-specific SVA-repeat regulation using reproducible methods.

PLoS ONE · Jun 24, 2021Peer-reviewedGenomics