Author
European Bioinformatics InstituteORCID 0000-0002-1751-9226Unclaimed ORCID profile · follow to get notified of new preprints
6 papers
Recent·Most cited
Joyce Mwongeli Ngoi, Eniyou Cheryll Oriero, Eyyüb S. Ünlü…·Lucas N. Amenga-Etego (16916177)
The paper analyzes amplicon sequencing data from 17,384 Plasmodium falciparum samples in West Africa to characterize antimalarial resistance patterns and their geographic distribution.
Matthew Forbes, Duncan Y. K. Ng, Róisín M. Boggan…·Ewan M. Harrison
The paper benchmarks human read removal methods in metagenomics, finding that high-sensitivity Bowtie2 with T2T-CHM13 reference improves removal while preserving microbial data.
Nishadi H. De Silva, Jyothish N Nair Thulasee Bhai, Marc Chakiachvili…·Andrew D. Yates
The paper describes the Ensembl COVID-19 resource, which integrates SARS-CoV-2 genomic data and variant annotations to support research on virus variants and their impact on therapeutics and vaccines.
Arang Rhie, Shane McCarthy, Olivier D. Fedrigo…·Hiram Clawson
The paper summarizes methods and lessons from assembling 16 vertebrate genomes, highlights the importance of long-read sequencing, and introduces the Vertebrate Genomes Project to generate complete reference genomes for all vertebrate species.
Stephen R. Doyle, Alan Tracey, Roz Laing…·James Anthony Cotton
The paper presents a high-quality, chromosome-scale genome assembly of Haemonchus contortus using long-read sequencing, revealing genetic diversity and transcriptional regulation.
Avril Coghlan, James Anthony Cotton, Nancy E. Holroyd…·Lian-Chen Wang
This paper compares genomes of 81 nematode and platyhelminth species to identify gene families related to parasitism and prioritize new drug targets.