Author

Yuta Ishizuka

University of BergenORCID 0000-0002-2036-902XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 4 Approach:experimental assay· 4 Assay:proteomics· 4 Research Focus:drug response / drug discovery· 2 Organism:mouse· 2 Research Focus:protein design· 2 Research Focus:protein structure prediction· 2 Organism:rat· 2

Frequent Co-Authors

Clive R. BramhamiD· 4 shared Erik Ingmar HalliniD· 2 shared François Philippe PauziniD· 2 shared Petri KursulaiD· 2 shared Rodolfo BaldinottiiD· 2 shared Aamra Mahboob· 1 shared Adrian SzumiD· 1 shared Adriana Covarrubias‐PintoiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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4 shared papersNeuroscience

Clive R. BramhamORCID

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Author profile →

5 papers

Recent·Most cited

Validation of a Commercially Available Non-Woven Fabric Electrode for Mouse Electroretinography

Yuta Ishizuka, Hiroyuki Kamao, Junko Matsuda

This paper evaluates a non-woven fabric electrode for mouse electroretinography, finding it comparable to standard contact lens electrodes in most metrics and superior in c-wave amplitudes during prolonged recordings.

bioRxiv · Oct 16, 2026 · PreprintNeuroscience

Arc/Arg3.1 binds the nuclear polyadenylate-binding protein RRM and regulates neuronal activity-dependent formation of nuclear speckles

Tambudzai Kanhema, Kamil Parobczak, Sudarshan S. Patil, Dagmara Holm-Kaczmarek, Erik Ingmar Hallin, Jan Ludwiczak, Andrzej Antoni Szczepankiewicz, François Philippe Pauzin, Aamra Mahboob, Adrian Szum, Yuta Ishizuka, Stanisław Dunin-Horkawicz, Petri Kursula, Grzegorz Marek Wilczynski, Adriana Magalska, Clive R. Bramham

This study identifies Arc/Arg3.1 as a regulator of PABPN1 nuclear speckles through direct binding, impacting mRNA processing during neuronal activity.

Cell Reports · Apr 1, 2025Peer-reviewedNeuroscience

A nanobody-based proximity ligation assay detects constitutive and stimulus-regulated native Arc/Arg3.1 oligomers in hippocampal neuronal dendrites

Rodolfo Baldinotti, François Philippe Pauzin, Hauk Fevang, Yuta Ishizuka, Clive R. Bramham

The paper develops a nanobody-based PLA to detect and quantify native Arc/Arg3.1 oligomers in hippocampal neurons, revealing constitutive and stimulus-regulated complexes.

Molecular Neurobiology · Oct 5, 2024Peer-reviewedNeuroscience

Development and validation of Arc nanobodies: new tools for probing Arc dynamics and function

Yuta Ishizuka, Tadiwos Feyissa Mergiya, Rodolfo Baldinotti, Ju Xu, Erik Ingmar Hallin, Sigurbjörn Markússon, Petri Kursula, Clive R. Bramham

The paper develops and validates Arc nanobodies to study Arc protein dynamics and function, showing their ability to bind Arc and enable live-cell labeling and purification.

Neurochemical Research · Mar 20, 2022Peer-reviewedNeuroscience

Herpes Simplex Virus type 1 neuronal infection triggers disassembly of key structural components of dendritic spines

Francisca Acuña, Adriana Covarrubias‐Pinto, Yuta Ishizuka, María Francisca Stolzenbach, Carolina Martín, Paula Salazar, Maite A. Castro, Clive R. Bramham, Carola Otth L

This study shows HSV-1 infection causes structural disassembly and functional deregulation in neurons through altered protein homeostasis and reduced spine scaffolding proteins.

Frontiers in Cellular Neuroscience · Feb 23, 2021Peer-reviewedNeuroscience