Author

Tremayne Mushayahama

University of Southern CaliforniaORCID 0000-0002-2874-6934Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Organism:C. elegans· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Organism:Drosophila· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Anushya MuruganujaniD· 2 shared Dustin EbertiD· 2 shared A. Jordan WrightiD· 1 shared Aaron M. ZorniD· 1 shared Adam C GibsoniD· 1 shared Ajay Shrivatsav· 1 shared Amy SingeriD· 1 shared Andrés BecerraiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Anushya MuruganujanORCID

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2 papers

Recent·Most cited

From SNPs to Pathways: A genome-wide benchmark of annotation discrepancies and their impact on protein- and pathway-level inference

Bryan Queme, Anushya Muruganujan, Dustin Ebert, Tremayne Mushayahama, W. James Gauderman, Huaiyu Mi

The paper benchmarks SNP annotation tools and gene models across the genome, showing discrepancies in annotation and their impact on pathway analysis.

BMC Genomics · Apr 6, 2026Peer-reviewedBioinformatics

Updates to the Alliance of Genome Resources Central Infrastructure

Suzi Aleksander, Anna V. Anagnostopoulos, Giulia Antonazzo, Valerio Arnaboldi, Helen L. Attrill, Andrés Becerra, Susan M Bello, Olin Blodgett, Yvonne M. Bradford, Carol J. Bult, Scott Cain, Brian R. Calvi, Seth Carbon, Juancarlos Chan, Wen J. Chen, , Aaron M. Zorn

The paper updates the Alliance of Genome Resources' central infrastructure, adding tools and enhancing data management and curation capabilities.

bioRxiv · Nov 20, 2023 · PreprintBioinformatics