Author

Omer Ziv

University of CambridgeORCID 0000-0002-3044-5006Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:long-read sequencing· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Eric Alexander MiskaiD· 3 shared Jonathan L. PriceiD· 2 shared Andrew Lim· 1 shared Friedemann WeberiD· 1 shared Grzegorz R. KudlaiD· 1 shared Ian GoodfellowiD· 1 shared Igor UlitskyiD· 1 shared Jian You LauiD· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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3 shared papersMolecular Biology

Eric Alexander MiskaORCID

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3 papers

Recent·Most cited

BioinformaticsBioinformaticsPeer-reviewedMar 29, 2024

comrades-OO: An Object-Oriented R Package for Comprehensive Analysis of RNA Structure Generated using RNA crosslinking experiments

Jonathan L. Price, Omer Ziv, Malte L. Pinckert…·Eric Alexander Miska

comradesOO is an R package for analyzing RNA structure data from COMRADES experiments, providing tools for processing, clustering, and comparing RNA structures and interactions.

1 citation

bulk RNA-seqstatistical model

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Molecular BiologybioRxivPreprintNov 19, 2021

Structural features within the NORAD long noncoding RNA underlie efficient repression of Pumilio activity

Omer Ziv, Svetlana Farberov, Jian You Lau…·Igor Ulitsky

The paper investigates the structural features of the NORAD lncRNA and their role in modulating Pumilio protein activity through RNA structure and interactions.

7 citations

humanlong-read sequencing

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Molecular BiologyMolecular CellPeer-reviewedNov 5, 2020

The short and long-range RNA-RNA Interactome of SARS-CoV-2

Omer Ziv, Jonathan L. Price, Lyudmila A. Shalamova…·Eric Alexander Miska

This study maps the RNA-RNA interactome of SARS-CoV-2, revealing long-range interactions and conserved structural elements important for viral replication and translation.

207 citationstop 3%

virusexperimental assay

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