Author

Dafne Campigli Di Giammartino

Weill Cornell MedicineORCID 0000-0002-3130-3536Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Assay:ChIP-seq· 5 Research Focus:differential expression· 4 Approach:experimental assay· 4 Research Focus:gene regulatory network inference· 4 Assay:bulk RNA-seq· 3 Organism:mouse· 3 Approach:statistical model· 3 Assay:Hi-C· 2

Frequent Co-Authors

Effie ApostolouiD· 5 shared Alexander PolyzosiD· 4 shared Andreas KloetgeniD· 3 shared Aristotelis TsirigosiD· 3 shared Matthias StadtfeldiD· 3 shared Dylan MurphyiD· 2 shared Theodore SakellaropoulosiD· 2 shared Abderhman AbuhashemiD· 1 shared

Activity by Year

2019-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 34 mutual co-author links

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5 shared papersMolecular Biology

Effie ApostolouORCID

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5 papers

Recent·Most cited

GenomicsMolecular CellPeer-reviewedApr 1, 2025

Three-dimensional regulatory hubs support oncogenic programs in glioblastoma

Sarah L. Breves, Dafne Campigli Di Giammartino, James Nicholson…·Effie Apostolou

This study identifies 3D regulatory hubs in glioblastoma stem cells and shows their role in oncogenic programs through computational and experimental analysis.

14 citations

humanChIP-seq

Molecular BiologyNature Structural & Molecular BiologyPeer-reviewedDec 5, 2023

Systematic mapping and modeling of 3D enhancer-promoter interactions in early mouse embryonic lineages reveal regulatory principles that determine the levels and cell-type specificity of gene expression

Dylan Murphy, Eralda Salataj, Dafne Campigli Di Giammartino…·Effie Apostolou

51 citationstop 3%

mouseChIP-seq

Molecular BiologyMolecular CellPeer-reviewedMar 18, 2021

Mitotic retention of H3K27 acetylation promotes rapid topological and transcriptional resetting of stem cell-related genes and enhancers upon G1 entry

Bobbie Pelham‐Webb, Alexander Polyzos, Luke Wojenski…·Effie Apostolou

This study shows that H3K27 acetylation retention during mitosis accelerates transcriptional and topological resetting of stem cell genes in mouse pluripotent stem cells upon G1 entry.

124 citationstop 2%

mouseChIP-seq

GenomicsGenome biologyPeer-reviewedNov 21, 2019

EpiMethylTag simultaneously detects ATAC-seq or ChIP-seq signals with DNA methylation

Priscillia Lhoumaud, Gunjan Sethia, Franco Izzo…·Jane A. Skok

EpiMethylTag combines ATAC-seq or ChIP-seq with bisulfite conversion to simultaneously assess chromatin accessibility/TF binding and DNA methylation.

41 citations

ATAC-seqChIP-seq

Molecular BiologybioRxivPreprintJun 7, 2019

KLF4 is involved in the organization and regulation of pluripotency-associated 3D enhancer networks

Dafne Campigli Di Giammartino, Andreas Kloetgen, Alexander Polyzos…·Effie Apostolou

This study investigates the role of KLF4 in chromatin reorganization and 3D enhancer rewiring during reprogramming of mouse embryonic fibroblasts to pluripotent stem cells.

4 citations

mouseChIP-seq