Author

Tommy Carstensen

University of CambridgeORCID 0000-0002-3672-9931Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 2 Genetic & Genomic Medicine· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 4 Approach:statistical model· 4 Research Focus:fine-mapping· 2 Research Focus:gene regulatory network inference· 2 Research Focus:GWAS / association mapping· 2 Assay:GWAS summary statistics· 2 Research Focus:variant effect prediction· 2 Assay:ATAC-seq· 1

Frequent Co-Authors

Alexander J. MentzeriD· 3 shared Beth D. KirkpatrickiD· 3 shared Genevieve L. WojcikiD· 3 shared Priya DuggaliD· 3 shared Rashidul HaqueiD· 3 shared William A. PetriiD· 3 shared Chelsea S. MarieiD· 2 shared Cristina PomillaiD· 2 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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3 shared papersGenetics

Alexander J. MentzerORCID

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Author profile →

4 papers

Recent·Most cited

Transcriptomics and chromatin accessibility in multiple African population samples

Marianne K. DeGorter, Pagé C. Goddard, Emre Karakoç, Soumya Kundu, Stephanie M. Yan, Daniel C. Nachun, Nathan S. Abell, Matthew Aguirre, Tommy Carstensen, Ziwei Chen, Matthew G. Durrant, Vikranth Dwaracherla, Kun-Jiang Feng, Michael J. Gloudemans, Naiomi Hunter, , Stephen B. Montgomery

The paper identifies novel transcripts, eQTLs, and caQTLs in African populations and fine-maps GWAS signals for complex diseases.

bioRxiv · Nov 4, 2023 · PreprintGenomics

Targeting hepatitis B vaccine escape using immunogenetics in Bangladeshi infants

Guillaume Butler‐Laporte, Kathryn Auckland, Zannatun Noor, Mamun Kabir, Masud Alam, Tommy Carstensen, Genevieve L. Wojcik, Amanda Yoon-Yee Chong, Cristina Pomilla, Janelle Annette Noble, Shana L. McDevitt, Gaby P. Smits, Susan Wareing, Fiona R.M. van der Klis, Katie JM Jeffery, , Alexander J. Mentzer

The paper identifies HLA variants associated with HBV vaccine response in Bangladeshi infants and links them to vaccine escape mechanisms.

medRxiv · Jun 26, 2023 · PreprintGenetic & Genomic Medicine

Genome-wide association study of cryptosporidiosis in infants implicates PRKCA

Genevieve L. Wojcik, Poonum S. Korpe, Chelsea S. Marie, Alexander J. Mentzer, Tommy Carstensen, Josyf C. Mychaleckyj, Beth D. Kirkpatrick, Stephen S. Rich, PATRICK J. CONCANNON, Abu Syed Golam Faruque, Rashidul Haque, William A. Petri, Priya Duggal

This paper conducts a GWAS to identify genetic variants associated with symptomatic cryptosporidiosis in infants, finding a strong association with an intronic SNP in PRKCA.

mBio · Feb 3, 2020Peer-reviewedGenetics

Genome-Wide Association Study Reveals Genetic Link Between Diarrhea-Associated Entamoeba histolytica Infection And Inflammatory Bowel Disease

Genevieve L. Wojcik, Chelsea S. Marie, Mayuresh M. Abhyankar, Nobuya Yoshida, Kôji Watanabe, Alexander J. Mentzer, Tommy Carstensen, Josyf C. Mychaleckyj, Beth D. Kirkpatrick, Stephen S. Rich, PATRICK J. CONCANNON, Rashidul Haque, George C. Tsokos, William A. Petri, Priya Duggal

This study identifies genetic variants associated with Entamoeba histolytica infection and links them to inflammatory bowel disease susceptibility.

mBio · Sep 18, 2018Peer-reviewedGenetics