Author

Eric M. Thompson

University of BergenORCID 0000-0002-3756-9036Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:non-human primate· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:database / resource· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Pavla NavrátilováiD· 3 shared Gemma DanksiD· 2 shared Aki MasunagaiD· 1 shared Aleksandra BlizninaiD· 1 shared Alfonso Ferrández‐RoldániD· 1 shared Andrew W. LiuiD· 1 shared Boris LenhardiD· 1 shared Charles PlessyiD· 1 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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3 shared papersGenomics

Pavla NavrátilováORCID

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3 papers

Recent·Most cited

Extreme genome scrambling in cryptic Oikopleura dioica species

Charles Plessy, Michael J. Mansfield, Aleksandra Bliznina, Aki Masunaga, Charlotte West, Yongkai Tan, Andrew W. Liu, Jan Grašič, María Sara del Río Pisula, Gaspar Sánchez-Serna, Marc Fabregà-Torrus, Alfonso Ferrández‐Roldán, Vittoria Roncalli, Pavla Navrátilová, Eric M. Thompson, , Nicholas M. Luscombe

The paper shows extreme genome scrambling in cryptic Oikopleura dioica species, revealing high rates of gene order rearrangements and insights into synteny conservation mechanisms.

Genome Research · Apr 15, 2024Peer-reviewedGenomics

Trans-splicing of mRNAs links gene transcription to translational control regulated by mTOR

Gemma Danks, Heloisa Galbiati, Martina Raasholm, Yamila N. Torres Cleuren, Eivind Valen, Pavla Navrátilová, Eric M. Thompson

The paper shows that trans-splicing of mRNAs links gene transcription to translational control regulated by mTOR in Oikopleura dioica.

BMC Genomics · Nov 29, 2019Peer-reviewedGenomics

Distinct Core Promoter Codes Drive Transcription Initiation At Key Developmental Transitions In A Marine Chordate

Gemma Danks, Pavla Navrátilová, Boris Lenhard, Eric M. Thompson

The paper identifies core promoter elements driving transcription initiation during developmental transitions in the marine chordate Oikopleura dioica, revealing both conserved and novel features compared to vertebrates.

BMC Genomics · Feb 26, 2018Peer-reviewedGenomics