Author

Patricia M.B. Favaro

Stanford MedicineORCID 0000-0002-3764-9538Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cell Biology· 1 Genomics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:experimental assay· 3 Organism:human· 3 Assay:ATAC-seq· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:differential expression· 1 Assay:flow cytometry· 1 Assay:multiome· 1

Frequent Co-Authors

Sean C. BendalliD· 3 shared Daniel Ho· 2 shared Meelad AmouzgariD· 2 shared Trevor BruceiD· 2 shared Amy F. CheniD· 1 shared Avery J. LamiD· 1 shared Crystal Lee MackalliD· 1 shared Elena SotilloiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersImmunology

Sean C. BendallORCID

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3 papers

Recent·Most cited

Cell Cycle Sensing Shapes Human T Cell Fate and Exhaustion Programs

Meelad Amouzgar, Tara Murty, Patricia M.B. Favaro, Elena Sotillo, Trevor Bruce, Daniel Ho, Avery J. Lam, Robert John Tibshirani, Crystal Lee Mackall, Sean C. Bendall

This study investigates how cell cycle dynamics influence T cell fate and exhaustion by analyzing single-cell data and manipulating cell cycle progression and signaling.

bioRxiv · Jun 12, 2026 · PreprintImmunology

A deep single cell mass cytometry approach to capture canonical and noncanonical cell cycle states

Meelad Amouzgar, Patricia M.B. Favaro, Daniel Ho, Trevor Bruce, Sean C. Bendall

This paper develops a deep single-cell mass cytometry approach to capture both canonical and noncanonical cell cycle states across diverse cell systems.

Nature Communications · Oct 3, 2025Peer-reviewedCell Biology

Integrating transcription factor abundance with chromatin accessibility in human erythroid lineage commitment

Reema Baskar, Amy F. Chen, Patricia M.B. Favaro, Warren D. Reynolds, Fabian Müller, Luciene Borges, Sizun Jiang, Hyun Shin Park, Eric T. Kool, William James Greenleaf, Sean C. Bendall

The paper introduces InTAC-seq to quantify chromatin accessibility and transcription factor abundance in fixed cells, showing GATA1's role in erythroid lineage commitment.

Cell Reports Methods · Mar 1, 2022Peer-reviewedGenomics