Author

Chris Papadopoulos

Centre National de la Recherche ScientifiqueORCID 0000-0002-4034-3687Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Genomics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:long-read sequencing· 2 Assay:Ribo-seq· 2 Organism:yeast· 2 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

José Carlos MontañésiD· 2 shared M. Mar AlbàiD· 2 shared Anikó Szegedi· 1 shared Anne LopesiD· 1 shared Antonin MorilloniD· 1 shared Covadonga VaraiD· 1 shared David CornuiD· 1 shared Elena HidalgoiD· 1 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersCancer Biology

José Carlos MontañésORCID

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3 papers

Recent·Most cited

Identification of a large class of cancer-germline microproteins as a source of immunotherapeutic targets

Marta E. Camarena, Covadonga Vara, Chris Papadopoulos, José Carlos Montañés, Sara Razquin-Sola, Marie Taillandier-Coindard, HuiSong Pak, Markus Müller, Nafiseh Khelgati, Juan Carlos García-Soriano, Puri Fortes, Michal Bassani-Sternberg, Júlia Perera‐Bel, M. Mar Albà

The paper identifies a large class of non-canonical cancer-germline antigens (ncCGAs) from lncRNAs and mRNA untranslated regions, showing their potential as immunotherapeutic targets.

bioRxiv · May 20, 2026 · PreprintCancer Biology

Evolutionary emergence and preservation of microproteins encoded by upstream ORFs

José Carlos Montañés, Chris Papadopoulos, Saif Al-Obaidi, Anikó Szegedi, William R. Blevins, Marc Talló-Parra, Juana Díez, Elena Hidalgo, M. Mar Albà

The paper identifies conserved microproteins from upstream ORFs in yeast using Ribo-Seq and Nanopore data, showing they are subject to purifying selection.

bioRxiv · Mar 6, 2026 · PreprintGenomics

Translation is a key determinant controlling the fate of cytoplasmic long non-coding RNAs

Sara Andjus, Ugo Szachnowski, Nicolas Vogt, Stamatia Gioftsidi, Isabelle Hatin, David Cornu, Chris Papadopoulos, Anne Lopes, Olivier Namy, Maxime Wéry, Antonin Morillon

The paper shows that cytoplasmic lncRNAs in yeast are translated, affecting their abundance and post-transcriptional regulation through mechanisms involving NMD and ribosome binding.

RNA · Mar 5, 2024Peer-reviewedMolecular Biology