Author

Magda Babina

Charité – Universitätsmedizin BerlinORCID 0000-0002-4500-7615Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Assay:CUT&Tag· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Adam BaliciD· 1 shared Ahmad M. N. Alhendi· 1 shared Ailsa J Carlisle· 1 shared Akira HasegawaiD· 1 shared Alan L. ArchibaldiD· 1 shared Alessandra CarboneiD· 1 shared Alessandro BonettiiD· 1 shared Alexander D. DiehliD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Adam BalicORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Arp2/3 complex-dependent actin regulation protects the survival of tissue-resident mast cells

Lukas Kaltenbach, Michael Mihlan, Svenja Ulferts, Mathias Müsken, Katharina M. Glaser, Gerhard Mittler, Magda Babina, Metello Innocenti, Robert Grosse, Theresia E. B. Stradal, Tim Lämmermann

This study identifies the Arp2/3 complex as critical for maintaining mast cell survival and tissue residency through actin-dependent mechano-protection.

bioRxiv · Feb 23, 2024 · PreprintImmunology

Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network.

Mathys Grapotte, Manu Saraswat, Chloé Bessière, Christophe Menichelli, Jordan A. Ramilowski, Jessica Severin, Yoshihide Hayashizaki, Masayoshi Itoh, Michihira Tagami, Mitsuyoshi Murata, Miki Kojima-Ishiyama, Shohei Noma, Shuhei Noguchi, Takeya Kasukawa, Akira Hasegawa, , Lothar C. Dieterich

The paper identifies widespread transcription initiation at microsatellites across species and develops deep learning models to predict STR-associated transcription and its impact on disease variants.

Nature Communications · Jun 2, 2021Peer-reviewedGenomics