Author

Allison M.L. Nixon

MaRSORCID 0000-0002-5540-4534Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:batch correction / integration· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Organism:mouse· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Adrian DraziciD· 1 shared Adrian Granda FariasiD· 1 shared Amy F. Roth· 1 shared Amy H.Y. TongiD· 1 shared Andrea Habsid· 1 shared Arshia Zernab HassaniD· 1 shared Ashwin SeetharamaniD· 1 shared Babak NamiiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperSystems Biology

Adrian DrazicORCID

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2 papers

Recent·Most cited

A global genetic interaction map of a human cell reveals conserved principles of genetic networks

Maximilian Billmann, Michael Costanzo, Xiang Zhang, Arshia Zernab Hassan, Mahfuzur Rahman, Kevin R. Brown, Katherine Chan, Amy H.Y. Tong, Carles Pons, Henry N. Ward, Catherine Ross, Jolanda S. van Leeuwen, Michael Aregger, Keith A. Lawson, Barbara Mair, , Charles M. Boone

The paper constructs a genome-scale genetic interaction network from 4 million double mutants in HAP1 cells, revealing conserved genetic network principles across species and uncovering novel gene functions and cancer dependencies.

bioRxiv · Jun 30, 2025 · PreprintSystems Biology

Adversarial learning enables unbiased organism-wide cross-species alignment of single-cell RNA data at scale

J. Javier Díaz-Mejía, Elias Williams, Brendan T. Innes, Octavian Focsa, Dylan Mendonca, Swechha Singh, Allison M.L. Nixon, Ronen Schuster, Matthew B. Buechler, Boris Hinz, Sam Cooper

This paper introduces a method to align single-cell RNA data across species and tissues using adversarial learning, revealing common cell types like macrophages and fibroblasts.

bioRxiv · Aug 11, 2024 · PreprintGenetics