Author

Pamela Mukhopadhyay

QIMR Berghofer Medical Research InstituteORCID 0000-0002-5905-1350Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Molecular Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Stephen H. KazakoffiD· 2 shared Ahmed MohamediD· 1 shared Ailin LepletieriD· 1 shared Alison M. DunningiD· 1 shared Andreas MölleriD· 1 shared Antonis C. AntoniouiD· 1 shared Bhagya Senadheera· 1 shared Daniel R. BarnesiD· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersSystems Biology

Stephen H. KazakoffORCID

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2 papers

Recent·Most cited

Systems BiologybioRxivPreprintMar 17, 2023

Integrative proteomics and transcriptomics of human T-cells reveals temporal metabolic reprogramming following TCR-induced activation

Harshi Thilanka Welegedara Weerakoon, Ahmed Mohamed, Yide Wong…·Ailin Lepletier

This study integrates proteomic and transcriptomic data from human T-cells to show time-dependent metabolic reprogramming and divergence in gene expression during activation.

DOI 10.1101/2023.03.17.532022

humanproteomics

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Molecular BiologyGenome biologyPeer-reviewedJan 7, 2020

Chromatin interactome mapping at 139 independent breast cancer risk signals

Jonathan Beesley, Haran Sivakumaran, Mahdi Moradi Marjaneh…·Stacey L. Edwards

The paper maps chromatin interactions at 139 breast cancer risk signals using Capture Hi-C and identifies candidate target genes and functional mechanisms.

43 citations

humanChIP-seq

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