Author

Caleb K. Chan

GenentechORCID 0000-0002-6367-5617Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Organism:mouse· 1 Assay:proteomics· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Sandra RostiD· 2 shared Ximo Pechuan-JorgeiD· 2 shared Aditya A. AnandiD· 1 shared Alexander Prilipko· 1 shared Amanda C. Lorentzian· 1 shared Anthony C. AntonelliiD· 1 shared Anugraha R. RajagopalaniD· 1 shared Artem Zubkov· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersImmunology

Sandra RostORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Intratumoral cDC1-T Cell Clusters Serve as Sites of Local Costimulation to Enhance CTL-Mediated Tumor Rejection

Catherine B. Carbone, Markus K. Brown, Camille-Charlotte Balança, Anthony C. Antonelli, Shiuh-Ming Luoh, Karl L. Banta, Vincent Rouilly, Ximo Pechuan-Jorge, Guadalupe Ortiz-Muñoz, Jeanne Cheung, Inés Marín, Ellen Duong, Aditya A. Anand, Caleb K. Chan, Anugraha R. Rajagopalan, , Christine Moussion

This study identifies spatially organized cDC1-T cell clusters within tumors as critical for enhancing CTL-mediated tumor rejection through local costimulation.

bioRxiv · May 19, 2025 · PreprintImmunology

SPEX: A modular end-to-end platform for high-plex tissue spatial omics analysis

Xiao Li, Ximo Pechuan-Jorge, Tyler Risom, Conrad Foo, Alexander Prilipko, Artem Zubkov, Caleb K. Chan, Patrick S. Chang, Frank Peale, James M. Ziai, Sandra Rost, Derrek P. Hibar, Lisa M. McGinnis, Evgeniy Tabatsky, Xin Ye, , Rajiv Jesudason

SPEX provides a web-based platform for spatial omics analysis, enabling modular and user-friendly processing of spatial transcriptomics and proteomics data.

GigaScience · Jan 1, 2025Peer-reviewedBioinformatics