Author

Imre Gáspár

European Molecular Biology LaboratoryORCID 0000-0002-6527-637XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 2 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Assay:ChIP-seq· 1 Assay:DNA methylation· 1 Research Focus:drug response / drug discovery· 1

Frequent Co-Authors

Adarsh MohananiD· 1 shared Aleksandar LaliciD· 1 shared Alexander J. TarashanskyiD· 1 shared Ana Hernández-PlazaiD· 1 shared Andrea B. KohniD· 1 shared Anna KreshukiD· 1 shared Antoine VallotiD· 1 shared Bence SzalaiiD· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperDevelopmental Biology

Adarsh MohananORCID

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3 papers

Recent·Most cited

Systems BiologybioRxivPreprintOct 2, 2023

The EFFECT benchmark suite: measuring cancer sensitivity prediction performance - without the bias

Bence Szalai, Imre Gáspár, Valér Kaszás…·Kristóf Z. Szalay

The paper introduces the EFFECT benchmark suite to evaluate cancer sensitivity prediction models by addressing data biases and improving benchmarking accuracy.

5 citations

humanbulk RNA-seq

𝕏 PostBluesky

Developmental BiologySciencePeer-reviewedNov 24, 2022

Zygotic genome activation by the totipotency pioneer factor Nr5a2

Johanna Gassler, Wataru Kobayashi, Imre Gáspár…·Kiku-e K. Tachibana

This study identifies Nr5a2 as a key activator of zygotic genome activation in mouse embryos, showing it regulates 72% of ZGA genes and is essential for development beyond the 2-cell stage.

158 citationstop 1%

mouseChIP-seq

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Developmental BiologySciencePeer-reviewedNov 4, 2021

Profiling cellular diversity in sponges informs animal cell type and nervous system evolution

Jacob M. Musser, Klaske J. Schippers, Michael Nickel…·Detlev Arendt

The paper identifies 18 cell types in sponges, including neuroid cells with synaptic gene expression, suggesting early neuro-immune system evolution.

242 citationstop 1%

scRNA-seqstatistical model

𝕏 PostBluesky