Author

Jan Budczies

Berlin Institute of Health at Charité - Universitätsmedizin BerlinORCID 0000-0002-6668-5327Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:benchmark study· 1 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Assay:metabolomics· 1 Organism:mouse· 1

Frequent Co-Authors

Albrecht StenzingeriD· 1 shared Alexander KlegeriD· 1 shared Alica K. Beutel· 1 shared Alireza AbaeiiD· 1 shared Anna HärleiD· 1 shared Anna‐Lena VolckmariD· 1 shared Austin SilvaiD· 1 shared Bei GaoiD· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperCancer Biology

Albrecht StenzingerORCID

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2 papers

Recent·Most cited

Cancer BiologybioRxivPreprintSep 16, 2025

Exploiting TGF-β-mediated Stromal Programming in Homologous Recombination-Deficient Pancreatic Cancer

Élodie Roger, Hannah M Mummey, Eleni Zimmer…·Alexander Kleger

This study shows that ATM-deficient pancreatic cancers reprogram the tumor microenvironment via TGF-β-driven myCAF enrichment, and targeting this stromal axis with chemotherapy improves therapeutic efficacy.

DOI 10.1101/2025.09.16.676458

mousehuman

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BioinformaticsOncotargetPeer-reviewedJun 11, 2019

Prioritization of metabolic genes as novel therapeutic targets in estrogen-receptor negative breast tumors using multi-omics data and text mining

Dinesh Kumar Barupal, Bei Gao, Jan Budczies…·Oliver Fiehn

The paper identifies under-reported metabolic genes as potential drug targets in ERneg breast tumors using multi-omics data and text mining.

15 citations

humanmetabolomics

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