Author

Sara Mahallati

University Health NetworkORCID 0000-0002-6765-0898Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:electronic health records· 3 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Approach:experimental assay· 2 Research Focus:dimensionality reduction· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Taufik A. ValianteiD· 2 shared Adrien PeyracheiD· 1 shared Alexandre Guet-McCreightiD· 1 shared Daniel LevensteiniD· 1 shared Dhruv MehrotraiD· 1 shared Etay HayiD· 1 shared Francesco Paolo BattagliaiD· 1 shared Gilberto R Vite· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersNeuroscience

Taufik A. ValianteORCID

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Author profile →

4 papers

Recent·Most cited

Pynapple, a toolbox for data analysis in neuroscience.

Guillaume D Viejo, Daniel Levenstein, Sofía Skromne Carrasco, Dhruv Mehrotra, Sara Mahallati, Gilberto R Vite, Henry Denny, Lucas Sjulson, Francesco Paolo Battaglia, Adrien Peyrache

Pynapple provides an open-source framework for analyzing time-resolved data in systems neuroscience, offering easy-to-use objects and methods for data manipulation and analysis.

eLife · May 17, 2023Peer-reviewedNeuroscience

Age-dependent increased sag amplitude in human pyramidal neurons dampens baseline cortical activity

Alexandre Guet-McCreight, Homeira Moradi Chameh, Sara Mahallati, Margaret Wishart, Shreejoy J. Tripathy, Taufik A. Valiante, Etay Hay

The paper identifies age-related increases in sag voltage amplitude in human pyramidal neurons and shows reduced baseline firing in older neuron microcircuits.

Cerebral Cortex · Aug 24, 2022Peer-reviewedNeuroscience

CellExplorer: a graphical user interface and standardized pipeline for visualizing and characterizing single neuron features

Peter C. Petersen, Joshua H. Siegle, Nicholas A. Steinmetz, Sara Mahallati, György Buzsáki

CellExplorer provides a framework for visualizing and characterizing single neuron features through standardized processing and a graphical interface.

bioRxiv · May 7, 2020 · PreprintNeuroscience

Cluster Tendency Assessment in Neuronal Spike Data

Sara Mahallati, James C. Bezdek, Miloš R. Popović, Taufik A. Valiante

The paper evaluates methods for estimating cluster structure in neuronal spike data and introduces iVAT for visualization without dimensionality reduction, showing t-SNE provides more reliable clustering results.

PLoS ONE · Nov 12, 2019Peer-reviewedNeuroscience