Author
Stanford MedicineORCID 0000-0002-8201-1621Unclaimed ORCID profile · follow to get notified of new preprints
Mutual co-authors in cluster
5 papers
Recent·Most cited
Shaocheng Wu, Mohita Mahajan, Maarten van der Linde…·Magdalena Matusiak
This study evaluates Atera, a spatial transcriptomics platform, showing its ability to resolve clonal cancer evolution and immune response in situ using DCIS samples.
David G.P. van IJzendoorn, Joanna Przybył, Trevor J. Hastie…·Matt van de Rijn
This paper uses machine learning to classify leiomyosarcoma based on methylation signatures, finding differences in PD-1 pathway activation and immune cell composition between tumor subtypes.
Maarten van der Linde, John S.A. Chrisinger, Elizabeth G. Demicco…·David G.P. van IJzendoorn
This paper uses single-nuclei RNA sequencing and spatial transcriptomics to characterize KPGCT, showing neoplastic cells express HMGA2::NCOR2 fusions and activate the hippo pathway, driving CSF1 production and macrophage recruitment.
Maximilian Haist, Magdalena Matusiak, Yuqi Tan…·Garry P. Nolan
The paper identifies spatial immune patterns in Merkel cell carcinoma linked to viral status and patient outcomes.
David G.P. van IJzendoorn, Magdalena Matusiak, Robert B. West, Matt van de Rijn
TissueViewer is a web-based tool for viewing large multiplexed image datasets from spatial biology techniques efficiently over the internet.