Author

Jiapei Chen

GenentechORCID 0000-0002-8205-8593Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Organism:mouse· 2 Assay:ATAC-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:imaging· 1

Frequent Co-Authors

Amanda G. KautzmaniD· 1 shared Avantika LaliD· 1 shared Christina E. BaeriD· 1 shared David Garfield· 1 shared Dorothy P. SchaferiD· 1 shared Eliah R. ShamiriD· 1 shared Eric Jinsheng HuangiD· 1 shared Erica MondoiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperNeuroscience

Amanda G. KautzmanORCID

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2 papers

Recent·Most cited

Deep learning design and in vivo validation of Müller glia-specific cis-regulatory elements

Oriol Fornés, Kyung Duk Koh, Rebecca M. Marton, Jiapei Chen, Kevin A. Marroquin, Gyeong Jin Kang, Avantika Lal, Sören Müller, Gökçen Eraslan, Eliah R. Shamir, Pratiksha I. Thakore, Heinrich Jasper, David Garfield

The paper designs Müller glia-specific cis-regulatory elements using deep learning and validates their function in vivo.

bioRxiv · Jul 21, 2026 · PreprintGenomics

A developmental analysis of juxtavascular microglia dynamics and interactions with the vasculature

Erica Mondo, Shannon C. Becker, Amanda G. Kautzman, Martina Schifferer, Christina E. Baer, Jiapei Chen, Eric Jinsheng Huang, Mikael Simons, Dorothy P. Schafer

This paper analyzes juxtavascular microglia dynamics in mice and humans, showing their developmental migration along vessels and stabilization as astrocyte endfeet ensheath the vasculature.

Journal of Neuroscience · Jul 13, 2020Peer-reviewedNeuroscience