Author

Jennifer Margaret Giltnane

GenentechORCID 0000-0002-8333-9995Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:proteomics· 2 Assay:spatial transcriptomics· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Organism:human· 1

Frequent Co-Authors

Conrad FooiD· 2 shared Lisa M. McGinnisiD· 2 shared Rajiv JesudasoniD· 2 shared Tyler RisomiD· 2 shared Aïcha BenTaiebiD· 1 shared Alexander Prilipko· 1 shared Alma AnderssoniD· 1 shared Alsu M. MissarovaiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersGenomics

Conrad FooORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Spatial Decoding of Tertiary Lymphoid Structure Maturation in Non-Small Cell Lung Cancer Using Deep Neural Networks

Bob Chen, Conrad Foo, Alma Andersson, Brandon D. Kayser, Yiming Yang, Alsu M. Missarova, Priyanka Kulkarni, Jan-Christian Huetter, Sharmila Chatterjee, Youngmi J. Kim, Yan Liang, Emily Killinbeck, Sarah R. Murphy, Eloisa Fuentes, Jennifer Margaret Giltnane, , Lisa M. McGinnis

The paper develops a framework to decode TLS maturation in NSCLC using spatial omics data and deep learning, identifying two distinct spatial ecosystems linked to patient outcomes.

bioRxiv · Jan 20, 2026 · PreprintGenomics

SPEX: A modular end-to-end platform for high-plex tissue spatial omics analysis

Xiao Li, Ximo Pechuan-Jorge, Tyler Risom, Conrad Foo, Alexander Prilipko, Artem Zubkov, Caleb K. Chan, Patrick S. Chang, Frank Peale, James M. Ziai, Sandra Rost, Derrek P. Hibar, Lisa M. McGinnis, Evgeniy Tabatsky, Xin Ye, , Rajiv Jesudason

SPEX provides a web-based platform for spatial omics analysis, enabling modular and user-friendly processing of spatial transcriptomics and proteomics data.

GigaScience · Jan 1, 2025Peer-reviewedBioinformatics