Author

Chamithi Karunanayake

Nationwide Children's HospitalORCID 0000-0002-8502-5615Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:zebrafish· 1

Frequent Co-Authors

Alexi M TallaniD· 1 shared Andrew M. VontelliD· 1 shared Benjamin D. SunkeliD· 1 shared Benjamin Z. StantoniD· 1 shared Cenny TaslimiD· 1 shared Genevieve C. KendalliD· 1 shared Jack P. KucinskiiD· 1 shared Rachel A. HoffmaniD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperCancer Biology

Alexi M TallanORCID

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1 paper

Recent·Most cited

Cancer BiologybioRxivPreprintFeb 19, 2026

Comparative modes of chromatin engagement by PAX::FOXO1 fusions in rhabdomyosarcoma

Alexi M Tallan, Jack P. Kucinski, Andrew M. Vontell…·Benjamin Z. Stanton

This paper compares the chromatin engagement mechanisms of PAX3::FOXO1 and PAX7::FOXO1 fusions in rhabdomyosarcoma using modified MNase ChIP and identifies distinct nucleosome targeting patterns.

1 citation

zebrafishChIP-seq

𝕏 PostBluesky